DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATPsynC and AVA-P4

DIOPT Version :10

Sequence 1:NP_651852.1 Gene:ATPsynC / 43693 FlyBaseID:FBgn0039830 Length:138 Species:Drosophila melanogaster
Sequence 2:NP_001185404.1 Gene:AVA-P4 / 843898 AraportID:AT1G75630 Length:200 Species:Arabidopsis thaliana


Alignment Length:64 Identity:17/64 - (26%)
Similarity:34/64 - (53%) Gaps:3/64 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 FIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLL 134
            |:||.||.| .:..||..||....  :|.|....::.:|...:|:...::..:|::.|::|.::
plant    17 FLGAAAALV-FSCMGAAYGTAKSG--VGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVII 77

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATPsynCNP_651852.1 ATP9 62..138 CDD:164765 17/64 (27%)
AVA-P4NP_001185404.1 V_ATP_synt_C 14..122 CDD:130170 17/64 (27%)
ATP-synt_Vo_c_ATP6C_rpt2 90..191 CDD:349416
Blue background indicates that the domain is not in the aligned region.

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