DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATPsynC and atp5mc3b

DIOPT Version :10

Sequence 1:NP_651852.1 Gene:ATPsynC / 43693 FlyBaseID:FBgn0039830 Length:138 Species:Drosophila melanogaster
Sequence 2:NP_571836.1 Gene:atp5mc3b / 81541 ZFINID:ZDB-GENE-020814-1 Length:140 Species:Danio rerio


Alignment Length:143 Identity:93/143 - (65%)
Similarity:112/143 - (78%) Gaps:17/143 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 FVSTVSRIAPVARSAFLANSKQYLRPLSSAIISQSQTLAAQNTTPVALLPQ-------IRSFQTS 59
            ||||.:.:...:|:.:        ||||::::|:....:|: .:| |.|||       :|.||||
Zfish     7 FVSTPALVRSGSRALY--------RPLSASVLSRPDVSSAE-ASP-AFLPQTAGSQVAVRGFQTS 61

  Fly    60 PVTRDIDSAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMG 124
            .::||||:|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Zfish    62 AISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMG 126

  Fly   125 LFCLMMAFLLLFA 137
            |||||:|||:|||
Zfish   127 LFCLMVAFLILFA 139

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATPsynCNP_651852.1 ATP9 62..138 CDD:164765 72/76 (95%)
atp5mc3bNP_571836.1 ATP9 66..140 CDD:164765 71/74 (96%)

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