DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ATPsynC and VhaPPA1-2

DIOPT Version :9

Sequence 1:NP_001247382.1 Gene:ATPsynC / 43693 FlyBaseID:FBgn0039830 Length:138 Species:Drosophila melanogaster
Sequence 2:NP_650406.2 Gene:VhaPPA1-2 / 41806 FlyBaseID:FBgn0262514 Length:212 Species:Drosophila melanogaster


Alignment Length:107 Identity:25/107 - (23%)
Similarity:39/107 - (36%) Gaps:30/107 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 TPVALLPQIRSFQTSPVTRDIDSAAKFIGAGAAT-----------------VGVAGSGAGIGTVF 92
            |.:.|...:..|.:..:..|....|..:..|.||                 ||:.||||.:..  
  Fly   111 TAILLSGNVNKFSSVRLITDSTVMATNMFTGFATFGAGLCVGMVNVACGIAVGIVGSGAALAD-- 173

  Fly    93 GSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLL 134
                   |.|.:|..::....|.|    .|:|||.|::|..:
  Fly   174 -------AANSALFVKILIVEIFG----SAIGLFGLIVAIYM 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATPsynCNP_001247382.1 ATP9 62..138 CDD:164765 22/90 (24%)
VhaPPA1-2NP_650406.2 ATP-synt_C 56..166 CDD:294318 10/54 (19%)
ATP-synt_C 143..204 CDD:278563 19/73 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0636
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.