DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATPsynC and atp5mc3a

DIOPT Version :10

Sequence 1:NP_651852.1 Gene:ATPsynC / 43693 FlyBaseID:FBgn0039830 Length:138 Species:Drosophila melanogaster
Sequence 2:NP_957470.1 Gene:atp5mc3a / 394151 ZFINID:ZDB-GENE-040426-857 Length:139 Species:Danio rerio


Alignment Length:141 Identity:95/141 - (67%)
Similarity:113/141 - (80%) Gaps:14/141 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 FVSTVSRIAPVARSAFLANSKQYLRPLSSAIISQSQ-----TLAAQNTTPVALLPQIRSFQTSPV 61
            ||||.:.:...:||.:        ||:|:|::|:.:     :.||...:|||.: .:||||||.|
Zfish     7 FVSTPALVRAGSRSVY--------RPVSAAVLSRPEAKPEVSTAAILQSPVAQM-ALRSFQTSAV 62

  Fly    62 TRDIDSAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLF 126
            :||||:|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Zfish    63 SRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLF 127

  Fly   127 CLMMAFLLLFA 137
            |||:|||:|||
Zfish   128 CLMVAFLILFA 138

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATPsynCNP_651852.1 ATP9 62..138 CDD:164765 72/76 (95%)
atp5mc3aNP_957470.1 ATP9 65..139 CDD:164765 71/74 (96%)

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