DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATPsynC and Vha16-2

DIOPT Version :9

Sequence 1:NP_001247382.1 Gene:ATPsynC / 43693 FlyBaseID:FBgn0039830 Length:138 Species:Drosophila melanogaster
Sequence 2:NP_729707.1 Gene:Vha16-2 / 39282 FlyBaseID:FBgn0028668 Length:158 Species:Drosophila melanogaster


Alignment Length:65 Identity:20/65 - (30%)
Similarity:33/65 - (50%) Gaps:7/65 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 IGAGAATVGVAG--SGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLL 134
            :||| .:||:.|  :|..||....:.:.|.|..|    :||...:|....:|.:.|:.|::|..|
  Fly    95 LGAG-LSVGLPGLTAGVAIGIAGDAGVRGTAEQP----RLFVGMVLILIFAEVLALYGLIVAIYL 154

  Fly   135  134
              Fly   155  154

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATPsynCNP_001247382.1 ATP9 62..138 CDD:164765 20/65 (31%)
Vha16-2NP_729707.1 PRK06558 14..158 CDD:235830 20/65 (31%)
ATP-synt_C 15..120 CDD:294318 9/25 (36%)
ATP-synt_C 94..154 CDD:278563 19/63 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0636
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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