DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATPsynC and Vha16-2

DIOPT Version :10

Sequence 1:NP_651852.1 Gene:ATPsynC / 43693 FlyBaseID:FBgn0039830 Length:138 Species:Drosophila melanogaster
Sequence 2:NP_729707.1 Gene:Vha16-2 / 39282 FlyBaseID:FBgn0028668 Length:158 Species:Drosophila melanogaster


Alignment Length:65 Identity:20/65 - (30%)
Similarity:33/65 - (50%) Gaps:7/65 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 IGAGAATVGVAG--SGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLL 134
            :||| .:||:.|  :|..||....:.:.|.|..|    :||...:|....:|.:.|:.|::|..|
  Fly    95 LGAG-LSVGLPGLTAGVAIGIAGDAGVRGTAEQP----RLFVGMVLILIFAEVLALYGLIVAIYL 154

  Fly   135  134
              Fly   155  154

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATPsynCNP_651852.1 ATP9 62..138 CDD:164765 20/65 (31%)
Vha16-2NP_729707.1 PRK13469 15..120 CDD:469780 9/25 (36%)
ATP-synt_Vo_c_ATP6C_rpt2 91..155 CDD:349416 20/65 (31%)

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