DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATPsynC and Vha16-4

DIOPT Version :10

Sequence 1:NP_651852.1 Gene:ATPsynC / 43693 FlyBaseID:FBgn0039830 Length:138 Species:Drosophila melanogaster
Sequence 2:NP_611169.1 Gene:Vha16-4 / 36900 FlyBaseID:FBgn0262513 Length:155 Species:Drosophila melanogaster


Alignment Length:65 Identity:25/65 - (38%)
Similarity:36/65 - (55%) Gaps:7/65 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 IGAGAATVGVAGSGAG--IGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLL 134
            :.||.| |||:|.|||  ||.|..:.:...|:.|    :||...||....:|.:||:.|::|..|
  Fly    93 LSAGLA-VGVSGMGAGIAIGVVGEAGVRASAQQP----KLFVAIILILIFAEVLGLYGLIVAIYL 152

  Fly   135  134
              Fly   153  152

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATPsynCNP_651852.1 ATP9 62..138 CDD:164765 25/65 (38%)
Vha16-4NP_611169.1 PRK13469 13..118 CDD:469780 13/25 (52%)
ATP-synt_Vo_c_ATP6C_rpt2 87..153 CDD:349416 25/65 (38%)

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