DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATPsynC and atp6v0cb

DIOPT Version :9

Sequence 1:NP_001247382.1 Gene:ATPsynC / 43693 FlyBaseID:FBgn0039830 Length:138 Species:Drosophila melanogaster
Sequence 2:NP_991117.1 Gene:atp6v0cb / 325402 ZFINID:ZDB-GENE-030131-4127 Length:153 Species:Danio rerio


Alignment Length:65 Identity:24/65 - (36%)
Similarity:38/65 - (58%) Gaps:7/65 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 IGAGAATVGVAGSGAG--IGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLL 134
            :||| .:||::|..||  ||.|..:.:.|.|:.|    :||...||....:|.:||:.|::|.:|
Zfish    91 LGAG-LSVGLSGLAAGFAIGIVGDAGVRGTAQQP----RLFVGMILILIFAEVLGLYGLIVALIL 150

  Fly   135  134
            Zfish   151  150

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATPsynCNP_001247382.1 ATP9 62..138 CDD:164765 24/65 (37%)
atp6v0cbNP_991117.1 V_ATP_synt_C 11..116 CDD:130170 11/25 (44%)
ATP-synt_Vo_c_ATP6C_rpt2 84..151 CDD:349416 24/65 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0636
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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