DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATPsynC and atp6v0b

DIOPT Version :9

Sequence 1:NP_001247382.1 Gene:ATPsynC / 43693 FlyBaseID:FBgn0039830 Length:138 Species:Drosophila melanogaster
Sequence 2:NP_955855.2 Gene:atp6v0b / 321724 ZFINID:ZDB-GENE-030131-443 Length:206 Species:Danio rerio


Alignment Length:89 Identity:23/89 - (25%)
Similarity:37/89 - (41%) Gaps:26/89 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 TSPVT---RDIDSAAKFIGAGAAT----------VGVAGSGAGIGTVFGSLIIGYARNPSLKQQL 109
            |:|.|   ::..:.....|||...          ||:.||||.:..         |:|.:|..::
Zfish   122 TTPETIGSKNYQAGYSMFGAGLTVGFSNLFCGICVGIVGSGAALAD---------AQNANLFVRI 177

  Fly   110 FSYAILGFALSEAMGLFCLMMAFL 133
            ....|.|    .|:|||.:::|.|
Zfish   178 LIVEIFG----SAIGLFGVIVAIL 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATPsynCNP_001247382.1 ATP9 62..138 CDD:164765 21/85 (25%)
atp6v0bNP_955855.2 PRK08344 49..200 CDD:236246 23/89 (26%)
ATP-synt_C 51..113 CDD:278563
ATP-synt_C 137..197 CDD:278563 19/72 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0636
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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