DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATPsynC and Atp6v0b

DIOPT Version :9

Sequence 1:NP_001247382.1 Gene:ATPsynC / 43693 FlyBaseID:FBgn0039830 Length:138 Species:Drosophila melanogaster
Sequence 2:NP_291095.1 Gene:Atp6v0b / 114143 MGIID:1890510 Length:205 Species:Mus musculus


Alignment Length:81 Identity:23/81 - (28%)
Similarity:34/81 - (41%) Gaps:23/81 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 RDIDSAAKFIGAG----------AATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGF 117
            |:..:.....|||          ...||:.||||.:..         |:||||..::....|.| 
Mouse   129 RNYHAGYSMFGAGLTVGLSNLFCGVCVGIVGSGAALAD---------AQNPSLFVKILIVEIFG- 183

  Fly   118 ALSEAMGLFCLMMAFL 133
               .|:|||.:::|.|
Mouse   184 ---SAIGLFGVIVAIL 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATPsynCNP_001247382.1 ATP9 62..138 CDD:164765 23/81 (28%)
Atp6v0bNP_291095.1 ATP-synt_Vo_c_ATP6F_rpt1 49..111 CDD:349417
ATP-synt_Vo_c_ATP6F_rpt2 133..197 CDD:349418 22/77 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0636
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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