DRSC/TRiP Functional Genomics Resources

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Protein Alignment chp and Lrrc15

DIOPT Version :10

Sequence 1:NP_001263137.1 Gene:chp / 43690 FlyBaseID:FBgn0267435 Length:1338 Species:Drosophila melanogaster
Sequence 2:NP_083249.1 Gene:Lrrc15 / 74488 MGIID:1921738 Length:579 Species:Mus musculus


Alignment Length:427 Identity:121/427 - (28%)
Similarity:191/427 - (44%) Gaps:83/427 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   485 ISSIENDAFHEIGHSLISLKMSHGYSGSALPAEPLRHLTSLQELDFSNNHISSMSDTSFHFLKNL 549
            |:.:..|.|..|. :||:|||......:.:|. ..|:|.||:.|..:||.:.::....|..:.||
Mouse    65 ITELPEDKFLNIS-ALIALKMEKNELANIMPG-AFRNLGSLRHLSLANNKLKNLPVRLFQDVNNL 127

  Fly   550 RLLELHDNRIEQVLKGTFQGDIHSKLEEISLRFNHLTSISQHTFFDLEALRKLHLDDNKIDKIER 614
            ..|.|.:|::.|:....|..  .|.|:|:.|..|:|..|.:..|..|..|.||:|.:|....:..
Mouse   128 ETLLLSNNQLVQIQPAQFSQ--FSNLKELQLYGNNLEYIPEGVFDHLVGLTKLNLGNNGFTHLSP 190

  Fly   615 RAFMNLDELEYLSLRGNKINNLADESFQNLPKLEILDMAFNQLPNFNFDYFDQVGTLSNLNVNVS 679
            |.|.:|..|:.|.|..|:::::...:|..|..|:.|.:..|           |:||||       
Mouse   191 RVFQHLGNLQVLRLYENRLSDIPMGTFDALGNLQELALQEN-----------QIGTLS------- 237

  Fly   680 HNQIRQLMYNSSWSGRNEHGGMYHS--NIKILDLSHNNISIIHPGYFRPAEISLTHLH---LGYN 739
                               .|::|:  |::.|.||:|:||.:.||.|    :.|.||:   |..|
Mouse   238 -------------------PGLFHNNRNLQRLYLSNNHISHLPPGIF----MQLPHLNKLTLFGN 279

  Fly   740 SLMNTTRDVFGNMPHLQWLDLSYNWIHELDFDAFKNTKQLQLVFFGHNYLS-------------- 790
            ||...:..|||.||:|:.|.|..|.|..|..:||.:..|||::...||.||              
Mouse   280 SLKELSPGVFGPMPNLRELWLYNNHITSLPDNAFSHLNQLQVLILSHNQLSYISPGAFNGLTNLR 344

  Fly   791 ----------DIPQDIFKPVQGLRIVDFSHNHLRGLPDNLFYN-GGMEKLDVSHNMMLKIPSSSL 844
                      |:..::|:.:..||.|...:|.||.||.::|.| .|:..:.:.:|.:..:|....
Mouse   345 ELSLHTNALQDLDGNVFRSLANLRNVSLQNNRLRQLPGSIFANVNGLMTIQLQNNNLENLPLGIF 409

  Fly   845 SSLAALTLCELHLSNN------FISTIHSMDLSNKFR 875
            ..|.  .||||.|.:|      .|..:|...:.|:.|
Mouse   410 DHLG--NLCELRLYDNPWRCDSNILPLHDWLILNRAR 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
chpNP_001263137.1 LRR <84..320 CDD:443914
leucine-rich repeat 84..103 CDD:275380
leucine-rich repeat 104..128 CDD:275380
leucine-rich repeat 129..152 CDD:275380
leucine-rich repeat 153..177 CDD:275380
leucine-rich repeat 178..201 CDD:275380
leucine-rich repeat 202..226 CDD:275380
leucine-rich repeat 227..250 CDD:275380
leucine-rich repeat 251..279 CDD:275380
leucine-rich repeat 280..326 CDD:275380
leucine-rich repeat 327..348 CDD:275380
leucine-rich repeat 352..375 CDD:275380
PPP1R42 355..564 CDD:455733 24/78 (31%)
leucine-rich repeat 376..401 CDD:275380
leucine-rich repeat 426..450 CDD:275378
leucine-rich repeat 451..474 CDD:275380
LRR_8 473..559 CDD:404697 23/73 (32%)
leucine-rich repeat 475..524 CDD:275380 12/38 (32%)
leucine-rich repeat 500..519 CDD:275380 6/18 (33%)
leucine-rich repeat 525..548 CDD:275380 5/22 (23%)
LRR <540..>834 CDD:443914 91/323 (28%)
leucine-rich repeat 549..574 CDD:275380 6/24 (25%)
leucine-rich repeat 575..598 CDD:275380 8/22 (36%)
leucine-rich repeat 599..622 CDD:275380 8/22 (36%)
leucine-rich repeat 623..646 CDD:275380 6/22 (27%)
leucine-rich repeat 647..730 CDD:275380 20/84 (24%)
leucine-rich repeat 648..673 CDD:275380 6/24 (25%)
leucine-rich repeat 674..705 CDD:275380 2/32 (6%)
LRR <730..1081 CDD:443914 53/180 (29%)
leucine-rich repeat 731..754 CDD:275380 11/25 (44%)
leucine-rich repeat 755..778 CDD:275380 8/22 (36%)
leucine-rich repeat 779..802 CDD:275380 8/46 (17%)
leucine-rich repeat 803..823 CDD:275380 9/19 (47%)
leucine-rich repeat 852..876 CDD:275380 10/30 (33%)
leucine-rich repeat 877..900 CDD:275380
leucine-rich repeat 901..925 CDD:275380
leucine-rich repeat 926..946 CDD:275380
leucine-rich repeat 947..970 CDD:275380
leucine-rich repeat 971..993 CDD:275380
leucine-rich repeat 994..1014 CDD:275380
leucine-rich repeat 1019..1042 CDD:275380
Lrrc15NP_083249.1 LRR_8 54..113 CDD:404697 17/49 (35%)
LRR 1 54..75 3/9 (33%)
leucine-rich repeat 58..78 CDD:275380 4/13 (31%)
LRR 2 78..99 6/21 (29%)
LRR 3 102..123 6/20 (30%)
LRR 103..>441 CDD:443914 106/382 (28%)
leucine-rich repeat 103..126 CDD:275380 5/22 (23%)
LRR 4 126..147 7/20 (35%)
leucine-rich repeat 127..150 CDD:275380 6/24 (25%)
LRR 5 150..171 7/20 (35%)
leucine-rich repeat 151..174 CDD:275380 8/22 (36%)
LRR 6 174..195 7/20 (35%)
leucine-rich repeat 175..198 CDD:275380 8/22 (36%)
LRR 7 198..219 5/20 (25%)
leucine-rich repeat 199..222 CDD:275380 6/22 (27%)
LRR 8 222..243 9/57 (16%)
leucine-rich repeat 223..246 CDD:275380 10/59 (17%)
LRR 9 246..267 10/24 (42%)
leucine-rich repeat 247..270 CDD:275380 10/26 (38%)
LRR 10 270..291 8/20 (40%)
leucine-rich repeat 271..294 CDD:275380 9/22 (41%)
LRR 11 294..315 8/20 (40%)
leucine-rich repeat 295..318 CDD:275380 8/22 (36%)
LRR 12 318..339 7/20 (35%)
leucine-rich repeat 319..342 CDD:275380 6/22 (27%)
LRR 13 342..363 2/20 (10%)
leucine-rich repeat 343..364 CDD:275380 2/20 (10%)
LRR 14 366..387 9/20 (45%)
leucine-rich repeat 367..387 CDD:275380 9/19 (47%)
LRR 15 390..411 3/20 (15%)
leucine-rich repeat 391..412 CDD:275380 2/20 (10%)
LRRCT 423..>462 CDD:214507 5/22 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 476..509
Blue background indicates that the domain is not in the aligned region.

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