DRSC/TRiP Functional Genomics Resources

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Protein Alignment chp and LOC5666869

DIOPT Version :10

Sequence 1:NP_001263137.1 Gene:chp / 43690 FlyBaseID:FBgn0267435 Length:1338 Species:Drosophila melanogaster
Sequence 2:XP_061503046.1 Gene:LOC5666869 / 5666869 VectorBaseID:AGAMI1_004724 Length:1154 Species:Anopheles gambiae


Alignment Length:1302 Identity:299/1302 - (22%)
Similarity:487/1302 - (37%) Gaps:360/1302 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 PPCTYNVMCTCSKSST-DLGIV----HCKNVPFPALPRMVNQSKVFMLHMENTGLREI-EPYFLQ 100
            |.|.|:.:...:.|.| .|.|.    :..:|.|                 ||:.|..| :..|.:
Mosquito    34 PTCRYSGLRFATPSDTASLSITFDSDYYSHVTF-----------------ENSSLSAIPQTVFAK 81

  Fly   101 STGMYRLKISGNHLTEIPDDAFTGLERSLWELILPQNDLVEIPSKSLRHLQKLRHLDLGYNHITH 165
            |:|:.....||                         .|:.|:..|:.||...|::|.|..|.:..
Mosquito    82 SSGVETFNASG-------------------------CDIYELLPKTFRHAADLKYLYLDNNRLRK 121

  Fly   166 IQHDSFRGLEDSLQTLILRENCISQLMSHSFSGLLILETLDLSGNNLFEIDPNVFVDGMPRLTRL 230
            .....|.|.. ||:.|.|.:|.:..:...:|.|:..::.:|.|| ||....|::|....|:|.:|
Mosquito   122 TYGSMFLGAR-SLELLSLSKNQLETIDPQTFRGISYVQEIDFSG-NLLRTLPDLFFAEKPKLKKL 184

  Fly   231 LLTDNILSEIPYDALGPLKSLRTLDISHNVIWSLSGNETYEIKASTKLNLDNLHLEYNHIEVLPP 295
            .|.||.|.|:..:..|.:.:|:.||        ||||....:.|.|                   
Mosquito   185 SLADNFLQELKKETFGEMTALQELD--------LSGNMLRTLVAGT------------------- 222

  Fly   296 NSFKYFDTVNRTFFDGNPIHTLREDAFKPARIREIYMRYCGLTNISPVAFDSLVNSLQILDLSGN 360
                         |||            |.::.::.::...|..|...||::|| .|:.|:||.|
Mosquito   223 -------------FDG------------PWQLEQLLLQNNRLEVIEATAFENLV-KLRGLNLSNN 261

  Fly   361 NLTKLHHKLFNNFDVLRVISMRDNKIKIQKPTETFNAVHYTLLKLDLSGDRN-----DPTNLQTL 420
            ||..|...:||:..|||.:.::.|.:. ...:.||.. :..|:.::|  |.|     .|..:|.|
Mosquito   262 NLKVLPATVFNSMGVLRELELQQNYLS-HLDSATFEE-NLRLVMINL--DNNTIATLQPALIQNL 322

  Fly   421 RKMRNM----------------RSLSISRLGSSS-----VGPEDFKDFGVELEDLQITRASLSGI 464
            ..::..                .|..:.||..|.     :.|..| |...:||||.:....||..
Mosquito   323 TDLQRFSIEYNQLQELDVQLFAHSTDLKRLWLSGNFLRHINPGTF-DTLEQLEDLYLAGNLLSTF 386

  Fly   465 QSHAFKHVRGLKRLDFSENGISSIENDAFHEIGHSLISLKMSHGYSGSALPAEPLRHLTSLQELD 529
            :...|::...||.||...|.|                          ..|.|..|...:.||:|.
Mosquito   387 EGGLFRNCSELKELDLGGNRI--------------------------KRLVAGSLEGASKLQKLT 425

  Fly   530 FSNNHISSMSDTSFHFLKNLRLLE---LHDNRIEQVLKGTFQGDIHSKLEEISLRFNHLTSISQH 591
            ...|.::.:.:   |||.:..||:   ..||.|..:..|.| |.: :.|..|.|..|.:..::..
Mosquito   426 IDKNEVTEIEE---HFLNDTPLLDTFSAEDNFIRNIPVGLF-GKL-TNLTTIILSDNQIKELAPG 485

  Fly   592 TFFDLEALRKLHLDDNKIDKIERRAFMNLDELEYLSLRGNKINNLADESFQNLPKLEILDMAFNQ 656
            ||..||::..|||:.|::..|: .:.:||..||||.|..|.|..|.:.:.:.:|.|..||:..|:
Mosquito   486 TFEGLESVINLHLNRNQLKHID-ASLLNLTNLEYLDLSYNFIRELDETALEGVPNLVTLDLESNR 549

  Fly   657 L--------PNFNFDY---------------FDQVGTLSNLNV---------------------- 676
            |        .....||               |.|:.:|..||:                      
Mosquito   550 LDRIPSAINKTIKLDYLGLQRNRISRLESGQFSQLSSLLTLNLDGNKIATMEQGCFRGLQSLTML 614

  Fly   677 ---------------NVSHNQIRQLMYNSSWSGRNEHGGMYHSNIKILDLSHNNISIIHPGYFRP 726
                           |...|..:..|..::::|.|........::.||....|::..:.||:...
Mosquito   615 AFVNATPEYESLDLFNDLQNLTQLFMEETNYTGLNSVRLDSLQSLDILSFDTNSLIGVDPGFLSG 679

  Fly   727 AEISLTHLHLGYNSLMNTTRDVFGNMPHLQWLDLSYNWIHELDFDAFKNTKQLQLVFFGHNYLSD 791
            .: :||.:.|..:|: ......||::|:|::|..:.|....||...|.....||.|......|..
Mosquito   680 LK-NLTRISLKKSSI-RFKASYFGSLPNLEYLAFTSNESIALDETFFAGAPSLQTVEIQDTLLES 742

  Fly   792 IP----------------------QDIFKPVQGLRIVDFSHNHLRGLPDNLFY-NGGMEKLDVSH 833
            |.                      :|||...:.|:.:.........|||:.|: |..::.|.:..
Mosquito   743 ISVNAFRRLANLTELYIGPFKRELKDIFTGNEALKTLRMKQMSFTTLPDHFFWANRRLDTLTIDG 807

  Fly   834 NMMLKIPSSSLSSLAALTLCEL------HLSNNFISTIHSMDLSNKFRSLRYLDISYNYLLRIDD 892
            |     |:          ||||      |::                 .|.|||:|.|.:..:..
Mosquito   808 N-----PN----------LCELKPAWFKHMA-----------------YLDYLDVSSNNISELSA 840

  Fly   893 AVFATMPKLAVLDLSHNRDLKVMDKSFMGLENSLIKLGLENISLSTVPE---IRLKYLREFRLGY 954
            .:|...|.|..|.|:.| .|:|:|........:|..|.||:..|:.:|.   ..|..|.|..||.
Mosquito   841 DLFDNTPVLHQLYLAEN-PLRVLDVGVFRKVGALTVLDLEDTLLTDLPVGIFDGLFKLEELFLGN 904

  Fly   955 NELPSIPQELAHNMSNLRMLDLSNNDLTNV-PLMTQALPHLRRLMLSGNPITSLNNNSFDGVNED 1018
            |:|.::|......:.:||||.||||.:.:| |.:...:|.|:.:.|..|.:|||::..| .....
Mosquito   905 NKLSNLPNGTFRELYSLRMLWLSNNSIEHVDPFLFADMPRLKEISLDDNRLTSLDDRLF-AAQLA 968

  Fly  1019 LEMLDISNFRLHYFEYGCLDSLPH-------------LRSLKLTAYSHLEHFNIPHLLRHHYNIR 1070
            |:.|.:|..|...|:   |.::|:             |||:|:|          |.|        
Mosquito   969 LQNLHLSGNRFVAFD---LTTMPYASTLIYLALDTNQLRSVKIT----------PGL-------- 1012

  Fly  1071 QLWIEAPQPFTRIVKKGSGPTQEMQTLQLGNPT----------DLQREMEGHLPSKLTNITFS-- 1123
             .::.|......:|:........:.||.:.|.:          |..:|:...| :::..:.|:  
Mosquito  1013 -EFLTADDNQLSVVETSDSDYYRLATLSVQNNSFSSLDSIYRFDRLQELNVTL-NRIAVLDFAMI 1075

  Fly  1124 ---GPQFTNLNERI-----LRGMRSPY-----LYMQLFNTSLQALPPNFFKYMGRVRNI-SLDIR 1174
               .|:.|.||..:     |....:||     .::.|.|.:|.....:....|.|::.: |.|.|
Mosquito  1076 ATKFPRLTVLNASVCAVESLGRTDNPYELKELQHLDLSNNTLTKAEMSKMGKMPRLKTLFSADNR 1140

  Fly  1175 YH 1176
            .|
Mosquito  1141 IH 1142

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
chpNP_001263137.1 LRR <84..320 CDD:443914 55/236 (23%)
leucine-rich repeat 84..103 CDD:275380 6/19 (32%)
leucine-rich repeat 104..128 CDD:275380 2/23 (9%)
leucine-rich repeat 129..152 CDD:275380 5/22 (23%)
leucine-rich repeat 153..177 CDD:275380 6/23 (26%)
leucine-rich repeat 178..201 CDD:275380 6/22 (27%)
leucine-rich repeat 202..226 CDD:275380 7/23 (30%)
leucine-rich repeat 227..250 CDD:275380 8/22 (36%)
leucine-rich repeat 251..279 CDD:275380 9/27 (33%)
leucine-rich repeat 280..326 CDD:275380 4/45 (9%)
leucine-rich repeat 327..348 CDD:275380 4/20 (20%)
leucine-rich repeat 352..375 CDD:275380 10/22 (45%)
PPP1R42 355..564 CDD:455733 57/237 (24%)
leucine-rich repeat 376..401 CDD:275380 5/24 (21%)
leucine-rich repeat 426..450 CDD:275378 7/44 (16%)
leucine-rich repeat 451..474 CDD:275380 7/22 (32%)
LRR_8 473..559 CDD:404697 20/88 (23%)
leucine-rich repeat 475..524 CDD:275380 9/48 (19%)
leucine-rich repeat 500..519 CDD:275380 2/18 (11%)
leucine-rich repeat 525..548 CDD:275380 7/22 (32%)
LRR <540..>834 CDD:443914 85/379 (22%)
leucine-rich repeat 549..574 CDD:275380 8/27 (30%)
leucine-rich repeat 575..598 CDD:275380 7/22 (32%)
leucine-rich repeat 599..622 CDD:275380 7/22 (32%)
leucine-rich repeat 623..646 CDD:275380 8/22 (36%)
leucine-rich repeat 647..730 CDD:275380 22/142 (15%)
leucine-rich repeat 648..673 CDD:275380 9/47 (19%)
leucine-rich repeat 674..705 CDD:275380 7/67 (10%)
LRR <730..1081 CDD:443914 97/396 (24%)
leucine-rich repeat 731..754 CDD:275380 6/22 (27%)
leucine-rich repeat 755..778 CDD:275380 6/22 (27%)
leucine-rich repeat 779..802 CDD:275380 8/44 (18%)
leucine-rich repeat 803..823 CDD:275380 5/20 (25%)
leucine-rich repeat 852..876 CDD:275380 5/29 (17%)
leucine-rich repeat 877..900 CDD:275380 7/22 (32%)
leucine-rich repeat 901..925 CDD:275380 7/23 (30%)
leucine-rich repeat 926..946 CDD:275380 7/22 (32%)
leucine-rich repeat 947..970 CDD:275380 7/22 (32%)
leucine-rich repeat 971..993 CDD:275380 10/22 (45%)
leucine-rich repeat 994..1014 CDD:275380 7/19 (37%)
leucine-rich repeat 1019..1042 CDD:275380 6/22 (27%)
LOC5666869XP_061503046.1 None

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