Sequence 1: | NP_001263137.1 | Gene: | chp / 43690 | FlyBaseID: | FBgn0267435 | Length: | 1338 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001030147.1 | Gene: | slit1b / 561685 | ZFINID: | ZDB-GENE-030722-4 | Length: | 1532 | Species: | Danio rerio |
Alignment Length: | 1285 | Identity: | 271/1285 - (21%) |
---|---|---|---|
Similarity: | 453/1285 - (35%) | Gaps: | 429/1285 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 134 LPQNDLVEIPSKSLRHLQKLRHLDLGYNHITHIQHDSFRGLEDSLQTLILRENCISQLMSHSFSG 198
Fly 199 LLILETLDLSGNNLFEIDPNVFVDGMPRLTRLLLTDNILSEIPYDALGPLKSLRTLDISHNVIWS 263
Fly 264 LSGNETYEIKASTKLNLDNLHLEYNHIEVLPPNSFKYFDTVNRTFFDGNPIHTLREDAFKPARIR 328
Fly 329 EIYMRYCGLTNISPVAFDSLVNSLQILDLSGNNLTKLHHKLFNNFDVLRVISMRDNKIKIQKPTE 393
Fly 394 TFNAVHYTLLKLDLSGDRNDPTNLQTLRK-MRNMRSLSISRLGSSSVGPEDFKDFGVELEDLQIT 457
Fly 458 RASLSGIQSHAFKHVRGLKRLDFSEN--GISSIENDAFHEIGHSLISLKMSHGYSGSALPAEPLR 520
Fly 521 HLTSLQELDFSNNHISSMSDTSFHFLKNLRLLELHDNRIEQVLKGTFQGDIHSKLEEISLRFNHL 585
Fly 586 TSISQHTFFDLEALRKLHLDDNKIDKIERRAFMNLDELEYLSLRGNKINNLADESFQNLPKLEIL 650
Fly 651 DMAFNQ---------LPNF-NFDYFDQVGT-------LSNLNVNVSHNQIRQLMYNSSWS----- 693
Fly 694 --GRNEHGGMYHSNIK------------ILDLSHNNISIIHPGYFRPAEISLTHLHLGYN--SLM 742
Fly 743 NTTRDVFGNMPHLQWLDLSYNWIHELDFDAFKNTKQLQLVFFGHNYLSDIPQDIFKPVQGLRIVD 807
Fly 808 FSHNHLRGLPDNLFYNGGMEKLDVSHNMMLKIPSSSLSSLAALTLCELHLSNNFISTIHSMDLSN 872
Fly 873 KFRSLRYLDISYNYLLRIDDAVFATMPKLAVLDLSHNRDLKVMDKSFMGLENSLIKLGLENISLS 937
Fly 938 TVP---EIRLKYLREFRLGYNELPSIPQELAHNMSNLRMLDLSNNDLTNVPLMTQALPHLRRLML 999
Fly 1000 SGNPITSLNNNSFDGV-NEDLEMLDISNFRLHYF--EYGCLDSLPHLRSLKLTAYSHLEHFNIPH 1061
Fly 1062 LLRHHYNIRQLWIEAPQPFTRIVKKGSGPTQEMQTLQLGNPTDLQREMEGHLPSKLTNITFSGPQ 1126
Fly 1127 FTNLNERILRGMRSPYLYMQLFNTSLQALPPNFFKYMGRVRNISLDIRYHNRNLKKIPNPNTGAV 1191
Fly 1192 PYLPNSVFLTDLKMSH-----TDLNCDCDLGWVEFWQRK--RRQYI--CSSQTWTD------TVF 1241
Fly 1242 RTFM-----------------NSPCQVYGRHNCDEHDDDLRETRC-------------------- 1269
Fly 1270 ------------ENKGGQQLMEALKFD-LECGWDNANCREAAFVVVMVCV 1306 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
chp | NP_001263137.1 | leucine-rich repeat | 84..103 | CDD:275380 | |
LRR_8 | 102..163 | CDD:290566 | 9/28 (32%) | ||
leucine-rich repeat | 104..128 | CDD:275380 | |||
LRR_RI | <128..261 | CDD:238064 | 39/126 (31%) | ||
leucine-rich repeat | 129..152 | CDD:275380 | 5/17 (29%) | ||
LRR_8 | 152..212 | CDD:290566 | 23/59 (39%) | ||
leucine-rich repeat | 153..177 | CDD:275380 | 11/23 (48%) | ||
leucine-rich repeat | 178..201 | CDD:275380 | 8/22 (36%) | ||
LRR_8 | 202..261 | CDD:290566 | 15/58 (26%) | ||
leucine-rich repeat | 202..226 | CDD:275380 | 6/23 (26%) | ||
leucine-rich repeat | 227..250 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 251..279 | CDD:275380 | 1/27 (4%) | ||
leucine-rich repeat | 280..326 | CDD:275380 | 10/45 (22%) | ||
LRR_8 | 326..386 | CDD:290566 | 10/59 (17%) | ||
leucine-rich repeat | 327..348 | CDD:275380 | 0/20 (0%) | ||
leucine-rich repeat | 352..375 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 376..401 | CDD:275380 | 5/24 (21%) | ||
leucine-rich repeat | 426..450 | CDD:275378 | 5/23 (22%) | ||
LRR_RI | <448..651 | CDD:238064 | 55/204 (27%) | ||
leucine-rich repeat | 451..474 | CDD:275380 | 4/22 (18%) | ||
LRR_8 | 473..559 | CDD:290566 | 20/87 (23%) | ||
leucine-rich repeat | 475..524 | CDD:275380 | 9/50 (18%) | ||
leucine-rich repeat | 500..519 | CDD:275380 | 3/18 (17%) | ||
leucine-rich repeat | 525..548 | CDD:275380 | 5/22 (23%) | ||
leucine-rich repeat | 549..574 | CDD:275380 | 7/24 (29%) | ||
LRR_8 | 573..633 | CDD:290566 | 21/59 (36%) | ||
leucine-rich repeat | 575..598 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 599..622 | CDD:275380 | 8/22 (36%) | ||
LRR_8 | 622..683 | CDD:290566 | 19/77 (25%) | ||
leucine-rich repeat | 623..646 | CDD:275380 | 11/22 (50%) | ||
leucine-rich repeat | 647..730 | CDD:275380 | 17/118 (14%) | ||
leucine-rich repeat | 648..673 | CDD:275380 | 7/41 (17%) | ||
leucine-rich repeat | 674..705 | CDD:275380 | 4/37 (11%) | ||
LRR_8 | 704..763 | CDD:290566 | 17/72 (24%) | ||
leucine-rich repeat | 731..754 | CDD:275380 | 7/24 (29%) | ||
LRR_8 | 753..813 | CDD:290566 | 16/59 (27%) | ||
leucine-rich repeat | 755..778 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 779..802 | CDD:275380 | 3/22 (14%) | ||
leucine-rich repeat | 803..823 | CDD:275380 | 5/19 (26%) | ||
leucine-rich repeat | 852..876 | CDD:275380 | 0/23 (0%) | ||
LRR_8 | 854..910 | CDD:290566 | 10/55 (18%) | ||
LRR_RI | <877..>1006 | CDD:238064 | 24/131 (18%) | ||
leucine-rich repeat | 877..900 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 901..925 | CDD:275380 | 4/23 (17%) | ||
leucine-rich repeat | 926..946 | CDD:275380 | 3/22 (14%) | ||
LRR_8 | 947..1004 | CDD:290566 | 10/56 (18%) | ||
leucine-rich repeat | 947..970 | CDD:275380 | 4/22 (18%) | ||
leucine-rich repeat | 971..993 | CDD:275380 | 5/21 (24%) | ||
LRR_8 | 992..1049 | CDD:290566 | 8/59 (14%) | ||
leucine-rich repeat | 994..1014 | CDD:275380 | 0/19 (0%) | ||
leucine-rich repeat | 1019..1042 | CDD:275380 | 5/24 (21%) | ||
slit1b | NP_001030147.1 | LRR_8 | 306..365 | CDD:290566 | 18/60 (30%) |
LRR_4 | 329..369 | CDD:289563 | 13/41 (32%) | ||
leucine-rich repeat | 331..354 | CDD:275380 | 7/23 (30%) | ||
LRR_8 | 353..437 | CDD:290566 | 30/84 (36%) | ||
leucine-rich repeat | 355..375 | CDD:275380 | 5/19 (26%) | ||
leucine-rich repeat | 403..426 | CDD:275380 | 11/22 (50%) | ||
leucine-rich repeat | 427..482 | CDD:275380 | 10/58 (17%) | ||
TPKR_C2 | 435..>465 | CDD:301599 | 4/29 (14%) | ||
LRR_RI | <511..625 | CDD:238064 | 29/118 (25%) | ||
leucine-rich repeat | 519..538 | CDD:275380 | 3/22 (14%) | ||
leucine-rich repeat | 539..563 | CDD:275380 | 7/24 (29%) | ||
LRR_8 | 562..622 | CDD:290566 | 16/59 (27%) | ||
leucine-rich repeat | 564..587 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 588..611 | CDD:275380 | 3/22 (14%) | ||
LRR_8 | 611..670 | CDD:290566 | 23/138 (17%) | ||
leucine-rich repeat | 612..635 | CDD:275380 | 11/72 (15%) | ||
leucine-rich repeat | 636..659 | CDD:275380 | 6/22 (27%) | ||
leucine-rich repeat | 660..753 | CDD:275380 | 25/154 (16%) | ||
LRRCT | 668..717 | CDD:214507 | 15/110 (14%) | ||
LRRNT | 732..764 | CDD:214470 | 6/31 (19%) | ||
leucine-rich repeat | 754..784 | CDD:275380 | 5/41 (12%) | ||
LRR_8 | 783..843 | CDD:290566 | 19/87 (22%) | ||
LRR_4 | 784..825 | CDD:289563 | 13/64 (20%) | ||
leucine-rich repeat | 785..808 | CDD:275380 | 9/46 (20%) | ||
leucine-rich repeat | 809..829 | CDD:275380 | 5/19 (26%) | ||
leucine-rich repeat | 833..856 | CDD:275380 | 7/37 (19%) | ||
LRRCT | 865..914 | CDD:214507 | 12/48 (25%) | ||
EGF_CA | 929..961 | CDD:238011 | 10/35 (29%) | ||
EGF_CA | 968..1001 | CDD:238011 | 5/32 (16%) | ||
EGF_CA | 1003..1039 | CDD:238011 | 5/17 (29%) | ||
EGF_CA | <1051..1079 | CDD:238011 | |||
LRRNT | 30..61 | CDD:214470 | 4/12 (33%) | ||
leucine-rich repeat | 41..58 | CDD:275380 | 3/9 (33%) | ||
leucine-rich repeat | 60..83 | CDD:275380 | 12/30 (40%) | ||
LRR_8 | 61..118 | CDD:290566 | 24/64 (38%) | ||
LRR_4 | 61..98 | CDD:289563 | 17/44 (39%) | ||
LRR_RI | <84..217 | CDD:238064 | 48/227 (21%) | ||
leucine-rich repeat | 84..107 | CDD:275380 | 8/22 (36%) | ||
leucine-rich repeat | 108..131 | CDD:275380 | 6/23 (26%) | ||
LRR_8 | 130..190 | CDD:290566 | 25/136 (18%) | ||
leucine-rich repeat | 132..155 | CDD:275380 | 9/51 (18%) | ||
leucine-rich repeat | 156..179 | CDD:275380 | 10/46 (22%) | ||
leucine-rich repeat | 180..203 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 204..247 | CDD:275380 | 14/72 (19%) | ||
LRRCT | 212..260 | CDD:214507 | 13/60 (22%) | ||
leucine-rich repeat | 248..330 | CDD:275380 | 19/100 (19%) | ||
LRRNT | 278..309 | CDD:214470 | 5/36 (14%) | ||
EGF_CA | 1082..1118 | CDD:238011 | |||
LamG | 1160..1314 | CDD:238058 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |