DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment chp and Tollo

DIOPT Version :9

Sequence 1:NP_001263137.1 Gene:chp / 43690 FlyBaseID:FBgn0267435 Length:1338 Species:Drosophila melanogaster
Sequence 2:NP_524757.1 Gene:Tollo / 44497 FlyBaseID:FBgn0029114 Length:1346 Species:Drosophila melanogaster


Alignment Length:1293 Identity:288/1293 - (22%)
Similarity:459/1293 - (35%) Gaps:397/1293 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 HLTEIPDDAFTGLERSLWELILPQNDL-------------VEIPSKSLRHLQKLRHLDLGYNHIT 164
            ||..|..:    ||.:.:.:|.|||.:             ..:...|.|.|.:||.|.:.|..:.
  Fly    51 HLRTINSE----LENTNFSVIQPQNTVRLRLECNDALFFQSSLSPDSFRSLVELRDLTIEYCKLG 111

  Fly   165 HIQHDSFRGLEDSLQTLILR------ENCISQLMSHSFSGLLILETLDLSGNNLFEIDPNVFVDG 223
            ::...|||||:: |:.|.:|      .....::.|:||.....||.||||.||::.|.     ||
  Fly   112 NLTDGSFRGLQE-LRNLTIRTHNGDWSTMSLEMASNSFVEFRQLERLDLSLNNIWLIP-----DG 170

  Fly   224 MPRLTRLLLTDNILSEIPYDALGPLKSLRTLDISHNVIWSLSGNETYEIKASTK------LNLDN 282
            |                    :.|||||:.|:.|:|.|..:| |..:....|::      ..|.:
  Fly   171 M--------------------VCPLKSLQHLNASYNKIQDIS-NFYFSASLSSRKARVCGSTLQS 214

  Fly   283 LHLEYNHIEVLPPNSFKYFDTVNRTFFDGNPIHTLREDAFKPARIREIYMRYCGLTNISPVAFDS 347
            |.|..|.:..||                     |....|.  .|:..:.|....::.::..||:.
  Fly   215 LDLSANKMVSLP---------------------TAMLSAL--GRLTHLNMAKNSMSFLADRAFEG 256

  Fly   348 LVNSLQILDLSGNNLTKLHHKLFNNFDVLRVISMRDNKIKIQKPTETFNAVHYTLLKLDLSGDRN 412
            |: ||:::|||.|.||.|..:||.....|:.|.:|:|.|.:..| ..|..: ..||.|||:.:  
  Fly   257 LL-SLRVVDLSANRLTSLPPELFAETKQLQEIYLRNNSINVLAP-GIFGEL-AELLVLDLASN-- 316

  Fly   413 DPTNLQTLRKMRNMRSLSISRLGSSSVGPEDFKDFGVELEDLQITRASLSGIQSHAFKHVRGLKR 477
                                                 ||....|..|:..|:        :.|..
  Fly   317 -------------------------------------ELNSQWINAATFVGL--------KRLMM 336

  Fly   478 LDFSENGISSIENDAFHEIGHSLISLKMSHGYSGSALPAEPLRHLTSLQELDFSNNHISSMSDTS 542
            ||.|.|.||.:|...|                          |.|.|||.|...:|:|..:....
  Fly   337 LDLSANKISRLEAHIF--------------------------RPLASLQILKLEDNYIDQLPGGI 375

  Fly   543 FHFLKNLRLLELHDNRIEQVLKGTFQGDIHSKLEEISLRFNHLTSISQHTFFDLEALRKLHLDDN 607
            |..|.||..|.|..|||..:.:.|.||  ...|..:||.||.::.:.|.:..:...|:.|||:||
  Fly   376 FADLTNLHTLILSRNRISVIEQRTLQG--LKNLLVLSLDFNRISRMDQRSLVNCSQLQDLHLNDN 438

  Fly   608 KIDKIERRAFMNLDELEYLSLRGNKINNLADESFQNLPKLEILDMAFNQLPNFNFDYFDQVGTLS 672
            |:..:. .|..::..|:.|.:..|.|:.:.:.|...|..|..|.|..|.|.:.....||::    
  Fly   439 KLQAVP-EALAHVQLLKTLDVGENMISQIENTSITQLESLYGLRMTENSLTHIRRGVFDRM---- 498

  Fly   673 NLNVNVSHNQIRQLMYNSSWSGRNEHGGMYHSNIKILDLSHNNISIIHPGYFRPAEISLTHLHLG 737
                                           |:::||:||.|.:..|..|..: ....|..:.|.
  Fly   499 -------------------------------SSLQILNLSQNKLKSIEAGSLQ-RNSQLQAIRLD 531

  Fly   738 YNSLMNTTRDVFGNMPHLQWLDLSYNWIHELDFDAFKNTKQLQLVFFGHNYLSDIPQDIFKPVQG 802
            .|.| .:...:|..:|:|.||::|.|.:.:.|:                   |.||       .|
  Fly   532 GNQL-KSIAGLFTELPNLVWLNISGNRLEKFDY-------------------SHIP-------IG 569

  Fly   803 LRIVDFSHNHLRGLPDNLF---YNGGMEKLDVSHNMMLKIPSSSLSSLAALTLCELHLSNNFIST 864
            |:.:|...|.:..| .|.|   ....:...|.|:|::.:|.:||:.:...:    |:|::|.|| 
  Fly   570 LQWLDVRANRITQL-GNYFEIESELSLSTFDASYNLLTEITASSIPNSVEV----LYLNDNQIS- 628

  Fly   865 IHSMDLSNKFRSLRYLDISYNYLLRIDDAVFATMPKLAVLDLSHNRDLKVMDKSFMGLENSLIKL 929
                                    :|....|...|.|..:||..||               |..|
  Fly   629 ------------------------KIQPYTFFKKPNLTRVDLVRNR---------------LTTL 654

  Fly   930 GLENISLSTVPEIRLKYLREFRLGYNELPSIPQELAHNMS-NLRMLDLSNNDLTNVP-LMTQALP 992
            ....:.||.:.|.|  .:.||.:|:|         |:... ||..|...|.:....| ||.....
  Fly   655 EPNALRLSPIAEDR--EIPEFYIGHN---------AYECDCNLDWLQKVNRESRTQPQLMDLDQI 708

  Fly   993 HLRRLMLSGNPITSLNNNSFDGVNEDLEMLDISNFRLHYFEY-GCLDSLPHLRSLKLTAYSHLEH 1056
            |.|.....|:...||    .:..::|.    :..:..|.|.. .|.|                  
  Fly   709 HCRLAYARGSSHVSL----IEAKSDDF----LCKYASHCFALCHCCD------------------ 747

  Fly  1057 FNIPHLLRHHYNIRQLWIEAP--------QPFTRIVKKGSGPTQEMQTLQLGNPTD-LQREMEGH 1112
                      :......:|.|        |.:|..|...|..:.| |||....|.| .|..::|:
  Fly   748 ----------FQACDCKMECPDRCSCYHDQSWTSNVVDCSRASYE-QTLPSHIPMDSTQLYLDGN 801

  Fly  1113 LPSKLTNITFSGP---QFTNLNERILRGMRSPYLY-------MQLFNTSLQALPPNFFKYMGRVR 1167
            ...:|.:..|.|.   :..:||...:..:.:...|       :||.:..|:||..|.|:.:..::
  Fly   802 NFRELQSHAFIGRKRLKVLHLNHSRIEVLHNRTFYGLLELEVLQLQSNQLKALNGNEFQGLDNLQ 866

  Fly  1168 NISLDIR-------------YHNRNLKKIPNPNTG-AV-PYLPNSVFLTDLKMSHTDLNCDCDLG 1217
            .:.|...             ||.:.|:...|..|. || .:||:  :|.:|:::.....|.|   
  Fly   867 ELYLQHNAIATIDTLTFTHLYHLKILRLDHNAITSFAVWNFLPS--YLNELRLASNPWTCSC--- 926

  Fly  1218 WVEFWQRKRRQYICSSQTWTDTVFRTFMNSPCQVYGRHNCDE--------HDDDLRETRCENKGG 1274
              ||.. |.|.||...:...|.     :...|.|...::..:        ....|...:|.....
  Fly   927 --EFID-KLRDYINRHEYVVDK-----LKMKCDVISGNSTQQMVIYPGSGEPASLPVVQCSQTLP 983

  Fly  1275 QQLMEALKFDLECGWDNANCREA----------------------AFVVVMVCVAMVF 1310
            ..|.....:..:.|.:||:...:                      ||:.||:|:::||
  Fly   984 LGLDNNFNYAEQAGGENASNATSTKMILNQPPKLDYIPILVAILTAFIFVMICISLVF 1041

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
chpNP_001263137.1 leucine-rich repeat 84..103 CDD:275380
LRR_8 102..163 CDD:290566 16/62 (26%)
leucine-rich repeat 104..128 CDD:275380 5/14 (36%)
LRR_RI <128..261 CDD:238064 42/151 (28%)
leucine-rich repeat 129..152 CDD:275380 7/35 (20%)
LRR_8 152..212 CDD:290566 22/65 (34%)
leucine-rich repeat 153..177 CDD:275380 9/23 (39%)
leucine-rich repeat 178..201 CDD:275380 6/28 (21%)
LRR_8 202..261 CDD:290566 20/58 (34%)
leucine-rich repeat 202..226 CDD:275380 12/23 (52%)
leucine-rich repeat 227..250 CDD:275380 2/22 (9%)
leucine-rich repeat 251..279 CDD:275380 8/33 (24%)
leucine-rich repeat 280..326 CDD:275380 8/45 (18%)
LRR_8 326..386 CDD:290566 20/59 (34%)
leucine-rich repeat 327..348 CDD:275380 3/20 (15%)
leucine-rich repeat 352..375 CDD:275380 10/22 (45%)
leucine-rich repeat 376..401 CDD:275380 7/24 (29%)
leucine-rich repeat 426..450 CDD:275378 0/23 (0%)
LRR_RI <448..651 CDD:238064 55/202 (27%)
leucine-rich repeat 451..474 CDD:275380 4/22 (18%)
LRR_8 473..559 CDD:290566 24/85 (28%)
leucine-rich repeat 475..524 CDD:275380 11/48 (23%)
leucine-rich repeat 500..519 CDD:275380 0/18 (0%)
leucine-rich repeat 525..548 CDD:275380 7/22 (32%)
leucine-rich repeat 549..574 CDD:275380 9/24 (38%)
LRR_8 573..633 CDD:290566 17/59 (29%)
leucine-rich repeat 575..598 CDD:275380 6/22 (27%)
leucine-rich repeat 599..622 CDD:275380 8/22 (36%)
LRR_8 622..683 CDD:290566 13/60 (22%)
leucine-rich repeat 623..646 CDD:275380 6/22 (27%)
leucine-rich repeat 647..730 CDD:275380 15/82 (18%)
leucine-rich repeat 648..673 CDD:275380 6/24 (25%)
leucine-rich repeat 674..705 CDD:275380 0/30 (0%)
LRR_8 704..763 CDD:290566 18/58 (31%)
leucine-rich repeat 731..754 CDD:275380 5/22 (23%)
LRR_8 753..813 CDD:290566 14/59 (24%)
leucine-rich repeat 755..778 CDD:275380 6/22 (27%)
leucine-rich repeat 779..802 CDD:275380 3/22 (14%)
leucine-rich repeat 803..823 CDD:275380 6/22 (27%)
leucine-rich repeat 852..876 CDD:275380 5/23 (22%)
LRR_8 854..910 CDD:290566 11/55 (20%)
LRR_RI <877..>1006 CDD:238064 29/130 (22%)
leucine-rich repeat 877..900 CDD:275380 2/22 (9%)
leucine-rich repeat 901..925 CDD:275380 5/23 (22%)
leucine-rich repeat 926..946 CDD:275380 6/19 (32%)
LRR_8 947..1004 CDD:290566 15/58 (26%)
leucine-rich repeat 947..970 CDD:275380 5/23 (22%)
leucine-rich repeat 971..993 CDD:275380 6/22 (27%)
LRR_8 992..1049 CDD:290566 10/57 (18%)
leucine-rich repeat 994..1014 CDD:275380 4/19 (21%)
leucine-rich repeat 1019..1042 CDD:275380 4/23 (17%)
TolloNP_524757.1 LRR_RI <85..281 CDD:238064 66/246 (27%)
leucine-rich repeat 100..123 CDD:275380 9/22 (41%)
leucine-rich repeat 124..144 CDD:275380 3/19 (16%)
LRR_8 152..222 CDD:290566 28/95 (29%)
leucine-rich repeat 154..177 CDD:275380 14/47 (30%)
leucine-rich repeat 178..201 CDD:275380 7/23 (30%)
LRR 210..656 CDD:227223 148/655 (23%)
leucine-rich repeat 212..235 CDD:275380 8/45 (18%)
leucine-rich repeat 236..259 CDD:275380 4/23 (17%)
leucine-rich repeat 260..283 CDD:275380 10/22 (45%)
LRR_RI 276..558 CDD:238064 94/396 (24%)
leucine-rich repeat 284..307 CDD:275380 7/24 (29%)
leucine-rich repeat 308..333 CDD:275380 10/71 (14%)
leucine-rich repeat 334..357 CDD:275380 11/48 (23%)
leucine-rich repeat 358..381 CDD:275380 7/22 (32%)
leucine-rich repeat 382..405 CDD:275380 9/24 (38%)
leucine-rich repeat 406..429 CDD:275380 6/22 (27%)
leucine-rich repeat 430..452 CDD:275380 8/22 (36%)
leucine-rich repeat 453..500 CDD:275380 13/81 (16%)
leucine-rich repeat 501..521 CDD:275380 7/20 (35%)
leucine-rich repeat 525..547 CDD:275380 5/22 (23%)
leucine-rich repeat 548..573 CDD:275380 11/50 (22%)
leucine-rich repeat 604..640 CDD:275380 10/64 (16%)
leucine-rich repeat 641..688 CDD:275380 18/72 (25%)
leucine-rich repeat 689..816 CDD:275380 32/163 (20%)
LRR_8 815..875 CDD:290566 11/59 (19%)
leucine-rich repeat 817..864 CDD:275380 10/46 (22%)
LRR_8 864..921 CDD:290566 12/58 (21%)
leucine-rich repeat 865..888 CDD:275380 1/22 (5%)
leucine-rich repeat 889..910 CDD:275380 6/20 (30%)
TIR 1076..1211 CDD:214587
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45453664
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.