Protein Alignment chp and cDIP

DIOPT Version :10

• Sequence 1: NP_001263137.1
• Gene: chp / 43690
• FlyBaseID: FBgn0267435
• Length: 1338
• Species: Drosophila melanogaster
• Sequence 2: NP_650951.1
• Gene: cDIP / 42512
• FlyBaseID: FBgn0038865
• Length: 554
• Species: Drosophila melanogaster
• Alignment Length: 463
• Identity: 116/463 - (25%)
• Similarity: 191/463 - (41%)
• Gaps: 107/463 - (23%)

  Fly   708 ILDLSHNNISIIHPGYFRPAEISLTHLHLGYNSLMNTTRDVFGNMPHLQWLDLSYNWIHELDFDA 772
            ||.||.|:|.::....||.|. :|..:.|..|.|.......|.|:..||:|||:.|.:..|..|.
  Fly   145 ILLLSDNHIEVLPTKTFRGAG-NLEFIFLNRNKLGKLQAGAFDNLLKLQYLDLTENRLEALAADV 208

  Fly   773 FKNTKQLQLVFFGHNYLSDIPQDIFKPVQGLRIVDFSHNHLRGLPDNLFYNGG----MEKLDVSH 833
            |...|.|:.|....|.|:.|..|:|.....|..|...:|.||.:.:..|.:.|    |:.:|:|:
  Fly   209 FAGLKSLRHVGLAGNQLTTIESDLFAHNPDLLSVAMQNNRLREVGEYAFRSRGRHHQMQYVDLSN 273

  Fly   834 N-----MMLKIPSSSLSSLAALTLCELHLSNNFISTIHSMDLS-NKFR--------SLRYLDISY 884
            |     ::|.|.:::|::    ..|.|...|.: .::.::||| |:.|        :|.:|.:..
  Fly   274 NPELVVLLLNINATNLTA----RNCSLDRVNLY-GSVTNVDLSDNRVRELYFPASEALEHLVLRN 333

  Fly   885 NYLLRIDDAVFATMPKLAVLDLSHNRDLKVMDKSFMGLENSLIKLGLENISLSTVPEIRLKYLRE 949
            |.|:::  |..:.:|:|..||::.|.:|..:...:                  ..|.:.:..||
  Fly   334 NSLVQL--ASLSRVPRLRHLDVADNPNLGQLPDGW------------------RTPHLEMLVLR- 377

  Fly   950 FRLGYNELPSIPQELAHNMSNLRMLDLSNNDLTNV-----PLMTQALPHLRRLMLSGNPITSLNN 1009
             ..|..||   |.|....|.||:.||:|.|:||.:     |.:||    |....:.||     |.
  Fly   378 -NTGQMEL---PLEALQGMQNLQKLDISGNNLTEIDPSAFPTLTQ----LTHFYIHGN-----NW 429

  Fly  1010 NSF------------DGVNEDLEMLDISNFRLHYFE-YGCLDSLPHLRSLKLTAYSHLEHFNIPH 1061
            |.|            :|:...::..| .:|...||. ..|:..||....:..::.|.:
  Fly   430 NCFSLRNIMDVLIRANGIAYTVDNYD-PDFPGEYFHGIACMYRLPEKEGVDSSSSSEI------- 486

  Fly  1062 LLRHHYNIRQLWIEAPQPFTRIVKKGSGPTQEMQTLQLGNPTDLQREMEGHLPSKLTNITFSGPQ 1126
                     ...:|: .|.|     .|....|:..|:     |..:.:..|..||. ::.||  :
  Fly   487 ---------SASVES-SPIT-----SSSDPSEVDKLR-----DELKAVVQHFDSKF-DLIFS--K 528

  Fly  1127 FTNLNERI 1134
            ...|||:|
  Fly   529 LAQLNEQI 536

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
chp	NP_001263137.1	LRR	<84..320	CDD:443914
		leucine-rich repeat	84..103	CDD:275380
		leucine-rich repeat	104..128	CDD:275380
		leucine-rich repeat	129..152	CDD:275380
		leucine-rich repeat	153..177	CDD:275380
		leucine-rich repeat	178..201	CDD:275380
		leucine-rich repeat	202..226	CDD:275380
		leucine-rich repeat	227..250	CDD:275380
		leucine-rich repeat	251..279	CDD:275380
		leucine-rich repeat	280..326	CDD:275380
		leucine-rich repeat	327..348	CDD:275380
		leucine-rich repeat	352..375	CDD:275380
		PPP1R42	355..564	CDD:455733
		leucine-rich repeat	376..401	CDD:275380
		leucine-rich repeat	426..450	CDD:275378
		leucine-rich repeat	451..474	CDD:275380
		LRR_8	473..559	CDD:404697
		leucine-rich repeat	475..524	CDD:275380
		leucine-rich repeat	500..519	CDD:275380
		leucine-rich repeat	525..548	CDD:275380
		LRR	<540..>834	CDD:443914	42/129 (33%)
		leucine-rich repeat	549..574	CDD:275380
		leucine-rich repeat	575..598	CDD:275380
		leucine-rich repeat	599..622	CDD:275380
		leucine-rich repeat	623..646	CDD:275380
		leucine-rich repeat	647..730	CDD:275380	9/21 (43%)
		leucine-rich repeat	648..673	CDD:275380
		leucine-rich repeat	674..705	CDD:275380
		LRR	<730..1081	CDD:443914	93/386 (24%)
		leucine-rich repeat	731..754	CDD:275380	6/22 (27%)
		leucine-rich repeat	755..778	CDD:275380	9/22 (41%)
		leucine-rich repeat	779..802	CDD:275380	7/22 (32%)
		leucine-rich repeat	803..823	CDD:275380	6/19 (32%)
		leucine-rich repeat	852..876	CDD:275380	8/32 (25%)
		leucine-rich repeat	877..900	CDD:275380	5/22 (23%)
		leucine-rich repeat	901..925	CDD:275380	5/23 (22%)
		leucine-rich repeat	926..946	CDD:275380	1/19 (5%)
		leucine-rich repeat	947..970	CDD:275380	8/22 (36%)
		leucine-rich repeat	971..993	CDD:275380	10/26 (38%)
		leucine-rich repeat	994..1014	CDD:275380	6/31 (19%)
		leucine-rich repeat	1019..1042	CDD:275380	6/23 (26%)
cDIP	NP_650951.1	LRR	107..>410	CDD:443914	82/295 (28%)
		leucine-rich repeat	118..142	CDD:275380
		leucine-rich repeat	143..166	CDD:275380	9/21 (43%)
		leucine-rich repeat	167..190	CDD:275380	6/22 (27%)
		leucine-rich repeat	191..214	CDD:275380	9/22 (41%)
		leucine-rich repeat	215..238	CDD:275380	7/22 (32%)
		leucine-rich repeat	239..265	CDD:275380	7/25 (28%)
		leucine-rich repeat	266..325	CDD:275380	15/63 (24%)
		leucine-rich repeat	326..347	CDD:275380	5/22 (23%)
		leucine-rich repeat	348..394	CDD:275380	14/68 (21%)
		leucine-rich repeat	395..418	CDD:275380	8/22 (36%)