DRSC/TRiP Functional Genomics Resources

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Protein Alignment chp and Toll-9

DIOPT Version :9

Sequence 1:NP_001263137.1 Gene:chp / 43690 FlyBaseID:FBgn0267435 Length:1338 Species:Drosophila melanogaster
Sequence 2:NP_001246846.1 Gene:Toll-9 / 40245 FlyBaseID:FBgn0036978 Length:900 Species:Drosophila melanogaster


Alignment Length:925 Identity:211/925 - (22%)
Similarity:356/925 - (38%) Gaps:285/925 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   256 ISHNVIWSLSGNETYEIKASTKLNLDNLHLEYNHIEVLPPNSFKYFDTVNRTFFDGNPIHTLRED 320
            |...|||....|.|  ::.|||.....|:|:.:|                     ||    |::|
  Fly    77 IKDEVIWWQFPNGT--LRDSTKKYAHKLYLDLSH---------------------GN----LKDD 114

  Fly   321 A--FKPARI-REIYMRYCGLTNISPVAFDSLV-----------NSLQILDLSGNNLTKLHHKLFN 371
            :  |:.|:: |::.:   ..|.:...||::|.           .||::|.|.|||..:|   :.:
  Fly   115 SDLFREAKLSRKVTI---WRTEVFSAAFNTLTAAPFRTLYSMRESLKLLSLRGNNFAEL---IPD 173

  Fly   372 NFDVLRVISMRDNKIKIQKPTETFNAV--HYTLLKL----DLSGDR------NDPTNL-QTLRKM 423
            ..|..|.::        :...|..|:|  |..||.|    ||. ||      |:.||: |::...
  Fly   174 AEDFARFVN--------ESRLEASNSVPHHCELLLLHNTTDLY-DRECYLYFNNNTNMGQSITTG 229

  Fly   424 RNMRSL------SISRLGSS--SVGPEDFKDFGVELEDLQITRASLSGIQSHAFKHVRGLKRLDF 480
            ||..:.      ...:.|||  |:....|... ..|.:|.|:..|:..:...||::|..|:||..
  Fly   230 RNYTNFIKVLKDRFDQHGSSSQSIAWATFPKM-PRLVELDISNCSIEYVSKEAFRNVSNLRRLFM 293

  Fly   481 SENGISSIENDAFHEIGHSLISLKMSHGYSGSALPAEPLRHLTSLQELDFSNNHISSMSDTSFHF 545
            |:|.|.:|.:|.|:.:                    :.:::|    :|.|:|            |
  Fly   294 SDNKIMTISHDTFYYV--------------------QGVQYL----DLSFTN------------F 322

  Fly   546 LKNLRLLELHDNRIEQVLKGTFQGDIHSKLEEISLRFNHLTSISQHTFFDLEALRKLHLDDNKID 610
            |                   |:...:.....|::|...:...|.|:.|..|..|..|.|..:|:.
  Fly   323 L-------------------TYSYQLQLPTLEMALSLIYGLKIQQNVFKYLPELIYLDLSHSKMT 368

  Fly   611 KIERRAFMNL-DELEYLSLRGNKINNLADESFQNLPKLEILDMAFNQLPNFNF--DYFDQV-GTL 671
            :....||.:| |:|::|||....|..::...|:| ..||.||::.|...::|.  |.||.: .||
  Fly   369 RNSAVAFAHLGDKLKFLSLCYTAIPMVSSTIFKN-TVLEGLDLSGNPYLSYNIIDDAFDGIANTL 432

  Fly   672 SNLNVNVSHNQIRQLMYNSSWSGRNEHGGMYHSNIKILDLSHNNISIIHPGYFRPAEISLTHLHL 736
            ..|....|:  |:.|.::.|.           .|:::|.|:.|||:.:.|..|:..| ||..|.|
  Fly   433 KYLYFERSN--IKDLEWSKSL-----------KNLQVLGLAGNNINALTPAMFQSLE-SLEILDL 483

  Fly   737 GYNSLMNTTRDVFGNMPHLQWLDLSYNWIHELDFDAFKNTKQLQLVFFGHN-YLSDIPQDIFKPV 800
            ..|.:.|..|..|.|...|:.|:|..|.|:.|..:..|:.::|..:..|.| ::.|........|
  Fly   484 SSNHVGNWYRSAFHNNSALRVLNLRSNTINMLSNEMLKDFERLDYLSLGDNDFICDCHLRAVVEV 548

  Fly   801 Q---------GLRIVDFSHNHLRGLPDNLFYNGGMEKLDVSHNMMLK--------IP--SSSLSS 846
            .         ..|::::|.|.:           |.|.:.::.::::.        ||  ..|.|:
  Fly   549 AAANNKDADCSYRLLNYSQNAV-----------GEEVISLAESLIIDRKLWQSRYIPWLQRSYSN 602

  Fly   847 LAALTLCELHLSNNFISTIHSM---------------------DLSNKFRSLRYLDISYNYL--- 887
            :.     |.:.:|:.|....|.                     ||:.||:.|.| :.|..|.   
  Fly   603 IR-----EFNRANHIIKLRFSSEDYMVAKCSAAQPYHLGDLDGDLTLKFQLLDY-EASQYYCFNN 661

  Fly   888 ---LRIDD--AVFATMPKLAVLDLSHNRDLKVMDKSFMGLENSLIK---LGLENISLSTVPEIRL 944
               |::|:  ....:|..||       .:|..:..:.:.:..||:.   ||.            :
  Fly   662 TDQLQVDELNCQIRSMSDLA-------EELHHVTNTVIAVMGSLVGACILGF------------I 707

  Fly   945 KYLREFRLGYNE--------LPSIPQELAHNMSNLRMLDLS----------NNDLTNVPLMTQAL 991
            .||:.:.:.|..        |.|..:|..:..:|:...|.|          .||.|.|  :.:.|
  Fly   708 IYLKRWHIHYYYSSLKSAALLSSASKESVNKFTNISQRDPSAVYDIFISYCQNDRTWV--LNELL 770

  Fly   992 PHLRRLMLSGNPITSLNNNSFD-GVNEDLEMLD--ISNFRLHYFEYGCLD---SLPHLRSLKLTA 1050
            |::..   :|:....|:...|. ||.    :||  ||          |:|   ||..:.|.|. .
  Fly   771 PNVEE---TGDVSICLHERDFQIGVT----ILDNIIS----------CMDRSYSLMLIISSKF-L 817

  Fly  1051 YSHLEHFNIPHLLRH 1065
            .||...|.: :|.:|
  Fly   818 LSHWCQFEM-YLAQH 831

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
chpNP_001263137.1 leucine-rich repeat 84..103 CDD:275380
LRR_8 102..163 CDD:290566
leucine-rich repeat 104..128 CDD:275380
LRR_RI <128..261 CDD:238064 1/4 (25%)
leucine-rich repeat 129..152 CDD:275380
LRR_8 152..212 CDD:290566
leucine-rich repeat 153..177 CDD:275380
leucine-rich repeat 178..201 CDD:275380
LRR_8 202..261 CDD:290566 1/4 (25%)
leucine-rich repeat 202..226 CDD:275380
leucine-rich repeat 227..250 CDD:275380
leucine-rich repeat 251..279 CDD:275380 9/22 (41%)
leucine-rich repeat 280..326 CDD:275380 8/47 (17%)
LRR_8 326..386 CDD:290566 15/71 (21%)
leucine-rich repeat 327..348 CDD:275380 4/21 (19%)
leucine-rich repeat 352..375 CDD:275380 7/22 (32%)
leucine-rich repeat 376..401 CDD:275380 5/26 (19%)
leucine-rich repeat 426..450 CDD:275378 5/31 (16%)
LRR_RI <448..651 CDD:238064 46/203 (23%)
leucine-rich repeat 451..474 CDD:275380 7/22 (32%)
LRR_8 473..559 CDD:290566 15/85 (18%)
leucine-rich repeat 475..524 CDD:275380 10/48 (21%)
leucine-rich repeat 500..519 CDD:275380 0/18 (0%)
leucine-rich repeat 525..548 CDD:275380 5/22 (23%)
leucine-rich repeat 549..574 CDD:275380 1/24 (4%)
LRR_8 573..633 CDD:290566 18/60 (30%)
leucine-rich repeat 575..598 CDD:275380 6/22 (27%)
leucine-rich repeat 599..622 CDD:275380 7/23 (30%)
LRR_8 622..683 CDD:290566 20/63 (32%)
leucine-rich repeat 623..646 CDD:275380 7/22 (32%)
leucine-rich repeat 647..730 CDD:275380 25/85 (29%)
leucine-rich repeat 648..673 CDD:275380 10/27 (37%)
leucine-rich repeat 674..705 CDD:275380 5/30 (17%)
LRR_8 704..763 CDD:290566 21/58 (36%)
leucine-rich repeat 731..754 CDD:275380 8/22 (36%)
LRR_8 753..813 CDD:290566 15/69 (22%)
leucine-rich repeat 755..778 CDD:275380 7/22 (32%)
leucine-rich repeat 779..802 CDD:275380 5/32 (16%)
leucine-rich repeat 803..823 CDD:275380 3/19 (16%)
leucine-rich repeat 852..876 CDD:275380 8/44 (18%)
LRR_8 854..910 CDD:290566 17/84 (20%)
LRR_RI <877..>1006 CDD:238064 30/157 (19%)
leucine-rich repeat 877..900 CDD:275380 7/30 (23%)
leucine-rich repeat 901..925 CDD:275380 3/23 (13%)
leucine-rich repeat 926..946 CDD:275380 3/22 (14%)
LRR_8 947..1004 CDD:290566 15/74 (20%)
leucine-rich repeat 947..970 CDD:275380 5/30 (17%)
leucine-rich repeat 971..993 CDD:275380 7/31 (23%)
LRR_8 992..1049 CDD:290566 16/62 (26%)
leucine-rich repeat 994..1014 CDD:275380 3/20 (15%)
leucine-rich repeat 1019..1042 CDD:275380 8/27 (30%)
Toll-9NP_001246846.1 leucine-rich repeat 157..185 CDD:275380 9/38 (24%)
LRR_8 262..322 CDD:290566 20/95 (21%)
leucine-rich repeat 264..287 CDD:275380 7/22 (32%)
leucine-rich repeat 288..311 CDD:275380 9/42 (21%)
leucine-rich repeat 312..356 CDD:275380 13/78 (17%)
LRR_8 <344..387 CDD:290566 14/42 (33%)
leucine-rich repeat 357..381 CDD:275380 7/23 (30%)
leucine-rich repeat 382..397 CDD:275380 5/14 (36%)
leucine-rich repeat 405..430 CDD:275380 9/24 (38%)
LRR_8 431..488 CDD:290566 21/70 (30%)
leucine-rich repeat 432..453 CDD:275380 6/33 (18%)
LRR_RI <449..536 CDD:238064 29/98 (30%)
leucine-rich repeat 454..477 CDD:275380 8/23 (35%)
LRR_8 477..536 CDD:290566 19/58 (33%)
leucine-rich repeat 478..501 CDD:275380 8/22 (36%)
leucine-rich repeat 502..525 CDD:275380 7/22 (32%)
TIR 751..891 CDD:214587 26/102 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45453683
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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