DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment chp and Toll-6

DIOPT Version :10

Sequence 1:NP_001263137.1 Gene:chp / 43690 FlyBaseID:FBgn0267435 Length:1338 Species:Drosophila melanogaster
Sequence 2:NP_524081.1 Gene:Toll-6 / 39663 FlyBaseID:FBgn0036494 Length:1514 Species:Drosophila melanogaster


Alignment Length:1005 Identity:228/1005 - (22%)
Similarity:414/1005 - (41%) Gaps:239/1005 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   137 NDLV----EIPSKSLRHLQKLRHLDLGYNHITHIQHDSFRGLEDSLQTLILRENCI------SQL 191
            ||.:    .:.::|..||.:|:.|.:.|..:..:......||| .|:.|.||.:.|      .::
  Fly   128 NDEIMAKSRLEAQSFAHLVRLQQLSIQYCKLGRLGRQVLDGLE-QLRNLTLRTHNILWPALNFEI 191

  Fly   192 MSHSFSGLLILETLDLSGNNLFEIDPNVFVDGMPRLTRLLLTDNILSEI-----------PYDAL 245
            .:.:||....||.||||.||::.:..|:|.. :..|:.|.:::|.|.::           |.:  
  Fly   192 EADAFSVTRRLERLDLSSNNIWSLPDNIFCT-LSELSALNMSENRLQDVNELGFRDRSKEPTN-- 253

  Fly   246 GPLKSLRTLDISHNVIWSLSGNETYEIKASTKLNLDNLHLEYNHIEVLPPNSFKYFDTVNRTFFD 310
            |..:|..|.:         |..::.....|..|:|:.|.:.:|...|||.|.|            
  Fly   254 GSTESTSTTE---------SAKKSSSSSTSCSLDLEYLDVSHNDFVVLPANGF------------ 297

  Fly   311 GNPIHTLREDAFKPARIREIYMRYCGLTNISPVAFDSLVNSLQILDLSGNNLTKLHHKLF-NNFD 374
                .|||       |:|.:.:...|::.|:..|...|.| ||||:||.|.:..|..:|| ....
  Fly   298 ----GTLR-------RLRVLSVNNNGISMIADKALSGLKN-LQILNLSSNKIVALPTELFAEQAK 350

  Fly   375 VLRVISMRDNKIKIQKPTETFNAVHYTLLKLDLSGDRNDPT--NLQTLRKMRNMRSLSISRLGSS 437
            :::.:.:::|.|.:..| :.|:.:. .|..||||.::...|  :..|...:..:..|::|....:
  Fly   351 IIQEVYLQNNSISVLNP-QLFSNLD-QLQALDLSMNQITSTWIDKNTFVGLIRLVLLNLSHNKLT 413

  Fly   438 SVGPEDFKDFGVELEDLQITRASLSGIQSHAFKHVRGLKRLDFSENGISSIENDAFHEIGHSLIS 502
            .:.||.|.|. ..|:.|.:....|..|.:..|..:..|..|..|.|.:..:  ||:...|..::|
  Fly   414 KLEPEIFSDL-YTLQILNLRHNQLENIAADTFAPMNNLHTLLLSHNKLKYL--DAYALNGLYVLS 475

  Fly   503 LKMSHGYSGSALPAEPLRHLTSLQELDFSNNHISSMSDTSFHFLKNLRLLELHDNRIEQVLKGTF 567
            |......:...:..:..|:.::||:|:.:.|.:.:: ..:...:::||.::|.:|.|..:....|
  Fly   476 LLSLDNNALIGVHPDAFRNCSALQDLNLNGNQLKTV-PLALRNMRHLRTVDLGENMITVMEDSAF 539

  Fly   568 QGDIHSKLEEISLRFNHLTSISQHTFFDLEALRKLHLDDNKIDKIERRAFMNLDELEYLSLRGNK 632
            :|  ...|..:.|..|:|.:|:.|||.||..|:.|:|..|:|..:|..||.....::.:.|.||:
  Fly   540 KG--LGNLYGLRLIGNYLENITMHTFRDLPNLQILNLARNRIAVVEPGAFEMTSSIQAVRLDGNE 602

  Fly   633 INNLADESFQNLPKLEILDMAFNQLPNFNFDYFDQVGTLSNLNVNVSHNQIRQLMYNSSWSGRNE 697
            :|:: :..|.|:|.|..|:::.|:|.:|::                                   
  Fly   603 LNDI-NGLFSNMPSLLWLNISDNRLESFDY----------------------------------- 631

  Fly   698 HGGMYHSNIKILDLSHNNISIIHPGYFRPAEISLTHLHLGYNSLMNTTRDVFGNMPHLQWLDLSY 762
              |...|.::.|||..|.:|            ||:: ..|.:|.:.           ||.||:|:
  Fly   632 --GHVPSTLQWLDLHKNRLS------------SLSN-RFGLDSELK-----------LQTLDVSF 670

  Fly   763 NWIHELDFDAFKNTKQLQLVFFGHNYLSDIPQDIFKPVQGLRIVDFSHNHL-------------- 813
            |.:..:...:..|:  ::|:|...|.::.:..|.|.....|..||...|.:              
  Fly   671 NQLQRIGPSSIPNS--IELLFLNDNLITTVDPDTFMHKTNLTRVDLYANQITTLDIKSLRILPVW 733

  Fly   814 --RGLPDNLFYNGGME-KLDVSHNMMLKIPSSSLSSLAALTLCELHLSNNFISTIHSMDLSNKFR 875
              |.||:  ||.||.. ..|.:.:.:.||  :.::|.....:.:|       .||:...|:|:.|
  Fly   734 EHRALPE--FYIGGNPFTCDCNIDWLQKI--NHITSRQYPRIMDL-------ETIYCKLLNNRER 787

  Fly   876 SLRYLDI----------------------------------------------SYNYLLRIDDAV 894
            :  |:.:                                              |.| ::....|.
  Fly   788 A--YIPLIEAEPKHFLCTYKTHCFAVCHCCEFDACDCEMTCPTNCTCFHDQTWSTN-IVECSGAA 849

  Fly   895 FATMPKLAVLDLSH-----NRDLKVMDKSFMGLENSLIKLGLENISLSTVPEIRLKYLREFRLGY 954
            ::.||:...:|.|.     |..:::...||:|.:| |..|...|.:::.:              |
  Fly   850 YSEMPRRVPMDTSELYIDGNNFVELAGHSFLGRKN-LAVLYANNSNVAHI--------------Y 899

  Fly   955 N-ELPSIPQELAHNMSNLRMLDLSNNDLTNVPLMTQALPHLRRLMLSGNPITSLNNNSFDGVNED 1018
            | ....:.:.|..::.:..::.|..|:..|       |.:||.|.|..|.|.|:.|.||..:.: 
  Fly   900 NTTFSGLKRLLILHLEDNHIISLEGNEFHN-------LENLRELYLQSNKIASIANGSFQMLRK- 956

  Fly  1019 LEMLDISNFRLHYFEYGCLDSLPHLRSLKL 1048
            ||:|.:...||.:||...|.:.|:|..:.|
  Fly   957 LEVLRLDGNRLMHFEVWQLSANPYLVEISL 986

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
chpNP_001263137.1 LRR <84..320 CDD:443914 50/203 (25%)
leucine-rich repeat 84..103 CDD:275380
leucine-rich repeat 104..128 CDD:275380
leucine-rich repeat 129..152 CDD:275380 5/18 (28%)
leucine-rich repeat 153..177 CDD:275380 6/23 (26%)
leucine-rich repeat 178..201 CDD:275380 7/28 (25%)
leucine-rich repeat 202..226 CDD:275380 10/23 (43%)
leucine-rich repeat 227..250 CDD:275380 6/33 (18%)
leucine-rich repeat 251..279 CDD:275380 3/27 (11%)
leucine-rich repeat 280..326 CDD:275380 11/45 (24%)
leucine-rich repeat 327..348 CDD:275380 4/20 (20%)
leucine-rich repeat 352..375 CDD:275380 10/23 (43%)
PPP1R42 355..564 CDD:455733 48/211 (23%)
leucine-rich repeat 376..401 CDD:275380 4/24 (17%)
leucine-rich repeat 426..450 CDD:275378 6/23 (26%)
leucine-rich repeat 451..474 CDD:275380 5/22 (23%)
LRR_8 473..559 CDD:404697 18/85 (21%)
leucine-rich repeat 475..524 CDD:275380 10/48 (21%)
leucine-rich repeat 500..519 CDD:275380 2/18 (11%)
leucine-rich repeat 525..548 CDD:275380 4/22 (18%)
LRR <540..>834 CDD:443914 72/310 (23%)
leucine-rich repeat 549..574 CDD:275380 7/24 (29%)
leucine-rich repeat 575..598 CDD:275380 10/22 (45%)
leucine-rich repeat 599..622 CDD:275380 8/22 (36%)
leucine-rich repeat 623..646 CDD:275380 6/22 (27%)
leucine-rich repeat 647..730 CDD:275380 12/82 (15%)
leucine-rich repeat 648..673 CDD:275380 4/24 (17%)
leucine-rich repeat 674..705 CDD:275380 1/30 (3%)
LRR <730..1081 CDD:443914 81/388 (21%)
leucine-rich repeat 731..754 CDD:275380 3/22 (14%)
leucine-rich repeat 755..778 CDD:275380 7/22 (32%)
leucine-rich repeat 779..802 CDD:275380 5/22 (23%)
leucine-rich repeat 803..823 CDD:275380 8/35 (23%)
leucine-rich repeat 852..876 CDD:275380 5/23 (22%)
leucine-rich repeat 877..900 CDD:275380 5/68 (7%)
leucine-rich repeat 901..925 CDD:275380 6/28 (21%)
leucine-rich repeat 926..946 CDD:275380 3/19 (16%)
leucine-rich repeat 947..970 CDD:275380 3/23 (13%)
leucine-rich repeat 971..993 CDD:275380 4/21 (19%)
leucine-rich repeat 994..1014 CDD:275380 10/19 (53%)
leucine-rich repeat 1019..1042 CDD:275380 8/22 (36%)
Toll-6NP_524081.1 PPP1R42 <135..>242 CDD:455733 30/108 (28%)
leucine-rich repeat 148..171 CDD:275380 6/23 (26%)
leucine-rich repeat 172..201 CDD:275380 7/28 (25%)
LRR_8 200..>246 CDD:404697 14/46 (30%)
leucine-rich repeat 202..278 CDD:275380 20/87 (23%)
leucine-rich repeat 229..249 CDD:275380 3/19 (16%)
leucine-rich repeat 279..302 CDD:275380 11/45 (24%)
LRR 299..654 CDD:443914 102/421 (24%)
leucine-rich repeat 303..326 CDD:275380 5/22 (23%)
leucine-rich repeat 327..350 CDD:275380 10/22 (45%)
leucine-rich repeat 352..375 CDD:275380 4/24 (17%)
leucine-rich repeat 376..401 CDD:275380 7/24 (29%)
leucine-rich repeat 402..425 CDD:275380 6/23 (26%)
leucine-rich repeat 426..449 CDD:275380 5/22 (23%)
leucine-rich repeat 450..473 CDD:275380 7/24 (29%)
leucine-rich repeat 474..497 CDD:275380 3/22 (14%)
leucine-rich repeat 498..518 CDD:275380 4/20 (20%)
leucine-rich repeat 521..544 CDD:275380 7/24 (29%)
leucine-rich repeat 545..566 CDD:275380 8/20 (40%)
leucine-rich repeat 569..592 CDD:275380 8/22 (36%)
leucine-rich repeat 593..615 CDD:275380 6/22 (27%)
leucine-rich repeat 616..637 CDD:275380 6/57 (11%)
leucine-rich repeat 638..662 CDD:275380 9/36 (25%)
LRR_8 662..719 CDD:404697 16/69 (23%)
leucine-rich repeat 663..684 CDD:275380 6/20 (30%)
leucine-rich repeat 685..708 CDD:275380 5/22 (23%)
leucine-rich repeat 709..728 CDD:275380 4/18 (22%)
LRR <863..>990 CDD:443914 36/147 (24%)
leucine-rich repeat 885..908 CDD:275380 5/36 (14%)
leucine-rich repeat 909..932 CDD:275380 5/29 (17%)
leucine-rich repeat 933..956 CDD:275380 10/22 (45%)
TIR 1114..1247 CDD:214587
Blue background indicates that the domain is not in the aligned region.

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