DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment chp and Toll-6

DIOPT Version :9

Sequence 1:NP_001263137.1 Gene:chp / 43690 FlyBaseID:FBgn0267435 Length:1338 Species:Drosophila melanogaster
Sequence 2:NP_001246765.1 Gene:Toll-6 / 39663 FlyBaseID:FBgn0036494 Length:1514 Species:Drosophila melanogaster


Alignment Length:1005 Identity:228/1005 - (22%)
Similarity:414/1005 - (41%) Gaps:239/1005 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   137 NDLV----EIPSKSLRHLQKLRHLDLGYNHITHIQHDSFRGLEDSLQTLILRENCI------SQL 191
            ||.:    .:.::|..||.:|:.|.:.|..:..:......||| .|:.|.||.:.|      .::
  Fly   128 NDEIMAKSRLEAQSFAHLVRLQQLSIQYCKLGRLGRQVLDGLE-QLRNLTLRTHNILWPALNFEI 191

  Fly   192 MSHSFSGLLILETLDLSGNNLFEIDPNVFVDGMPRLTRLLLTDNILSEI-----------PYDAL 245
            .:.:||....||.||||.||::.:..|:|.. :..|:.|.:::|.|.::           |.:  
  Fly   192 EADAFSVTRRLERLDLSSNNIWSLPDNIFCT-LSELSALNMSENRLQDVNELGFRDRSKEPTN-- 253

  Fly   246 GPLKSLRTLDISHNVIWSLSGNETYEIKASTKLNLDNLHLEYNHIEVLPPNSFKYFDTVNRTFFD 310
            |..:|..|.:         |..::.....|..|:|:.|.:.:|...|||.|.|            
  Fly   254 GSTESTSTTE---------SAKKSSSSSTSCSLDLEYLDVSHNDFVVLPANGF------------ 297

  Fly   311 GNPIHTLREDAFKPARIREIYMRYCGLTNISPVAFDSLVNSLQILDLSGNNLTKLHHKLF-NNFD 374
                .|||       |:|.:.:...|::.|:..|...|.| ||||:||.|.:..|..:|| ....
  Fly   298 ----GTLR-------RLRVLSVNNNGISMIADKALSGLKN-LQILNLSSNKIVALPTELFAEQAK 350

  Fly   375 VLRVISMRDNKIKIQKPTETFNAVHYTLLKLDLSGDRNDPT--NLQTLRKMRNMRSLSISRLGSS 437
            :::.:.:::|.|.:..| :.|:.:. .|..||||.::...|  :..|...:..:..|::|....:
  Fly   351 IIQEVYLQNNSISVLNP-QLFSNLD-QLQALDLSMNQITSTWIDKNTFVGLIRLVLLNLSHNKLT 413

  Fly   438 SVGPEDFKDFGVELEDLQITRASLSGIQSHAFKHVRGLKRLDFSENGISSIENDAFHEIGHSLIS 502
            .:.||.|.|. ..|:.|.:....|..|.:..|..:..|..|..|.|.:..:  ||:...|..::|
  Fly   414 KLEPEIFSDL-YTLQILNLRHNQLENIAADTFAPMNNLHTLLLSHNKLKYL--DAYALNGLYVLS 475

  Fly   503 LKMSHGYSGSALPAEPLRHLTSLQELDFSNNHISSMSDTSFHFLKNLRLLELHDNRIEQVLKGTF 567
            |......:...:..:..|:.::||:|:.:.|.:.:: ..:...:::||.::|.:|.|..:....|
  Fly   476 LLSLDNNALIGVHPDAFRNCSALQDLNLNGNQLKTV-PLALRNMRHLRTVDLGENMITVMEDSAF 539

  Fly   568 QGDIHSKLEEISLRFNHLTSISQHTFFDLEALRKLHLDDNKIDKIERRAFMNLDELEYLSLRGNK 632
            :|  ...|..:.|..|:|.:|:.|||.||..|:.|:|..|:|..:|..||.....::.:.|.||:
  Fly   540 KG--LGNLYGLRLIGNYLENITMHTFRDLPNLQILNLARNRIAVVEPGAFEMTSSIQAVRLDGNE 602

  Fly   633 INNLADESFQNLPKLEILDMAFNQLPNFNFDYFDQVGTLSNLNVNVSHNQIRQLMYNSSWSGRNE 697
            :|:: :..|.|:|.|..|:::.|:|.:|::                                   
  Fly   603 LNDI-NGLFSNMPSLLWLNISDNRLESFDY----------------------------------- 631

  Fly   698 HGGMYHSNIKILDLSHNNISIIHPGYFRPAEISLTHLHLGYNSLMNTTRDVFGNMPHLQWLDLSY 762
              |...|.::.|||..|.:|            ||:: ..|.:|.:.           ||.||:|:
  Fly   632 --GHVPSTLQWLDLHKNRLS------------SLSN-RFGLDSELK-----------LQTLDVSF 670

  Fly   763 NWIHELDFDAFKNTKQLQLVFFGHNYLSDIPQDIFKPVQGLRIVDFSHNHL-------------- 813
            |.:..:...:..|:  ::|:|...|.::.:..|.|.....|..||...|.:              
  Fly   671 NQLQRIGPSSIPNS--IELLFLNDNLITTVDPDTFMHKTNLTRVDLYANQITTLDIKSLRILPVW 733

  Fly   814 --RGLPDNLFYNGGME-KLDVSHNMMLKIPSSSLSSLAALTLCELHLSNNFISTIHSMDLSNKFR 875
              |.||:  ||.||.. ..|.:.:.:.||  :.::|.....:.:|       .||:...|:|:.|
  Fly   734 EHRALPE--FYIGGNPFTCDCNIDWLQKI--NHITSRQYPRIMDL-------ETIYCKLLNNRER 787

  Fly   876 SLRYLDI----------------------------------------------SYNYLLRIDDAV 894
            :  |:.:                                              |.| ::....|.
  Fly   788 A--YIPLIEAEPKHFLCTYKTHCFAVCHCCEFDACDCEMTCPTNCTCFHDQTWSTN-IVECSGAA 849

  Fly   895 FATMPKLAVLDLSH-----NRDLKVMDKSFMGLENSLIKLGLENISLSTVPEIRLKYLREFRLGY 954
            ::.||:...:|.|.     |..:::...||:|.:| |..|...|.:::.:              |
  Fly   850 YSEMPRRVPMDTSELYIDGNNFVELAGHSFLGRKN-LAVLYANNSNVAHI--------------Y 899

  Fly   955 N-ELPSIPQELAHNMSNLRMLDLSNNDLTNVPLMTQALPHLRRLMLSGNPITSLNNNSFDGVNED 1018
            | ....:.:.|..::.:..::.|..|:..|       |.:||.|.|..|.|.|:.|.||..:.: 
  Fly   900 NTTFSGLKRLLILHLEDNHIISLEGNEFHN-------LENLRELYLQSNKIASIANGSFQMLRK- 956

  Fly  1019 LEMLDISNFRLHYFEYGCLDSLPHLRSLKL 1048
            ||:|.:...||.:||...|.:.|:|..:.|
  Fly   957 LEVLRLDGNRLMHFEVWQLSANPYLVEISL 986

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
chpNP_001263137.1 leucine-rich repeat 84..103 CDD:275380
LRR_8 102..163 CDD:290566 8/29 (28%)
leucine-rich repeat 104..128 CDD:275380
LRR_RI <128..261 CDD:238064 36/144 (25%)
leucine-rich repeat 129..152 CDD:275380 5/18 (28%)
LRR_8 152..212 CDD:290566 20/65 (31%)
leucine-rich repeat 153..177 CDD:275380 6/23 (26%)
leucine-rich repeat 178..201 CDD:275380 7/28 (25%)
LRR_8 202..261 CDD:290566 18/69 (26%)
leucine-rich repeat 202..226 CDD:275380 10/23 (43%)
leucine-rich repeat 227..250 CDD:275380 6/33 (18%)
leucine-rich repeat 251..279 CDD:275380 3/27 (11%)
leucine-rich repeat 280..326 CDD:275380 11/45 (24%)
LRR_8 326..386 CDD:290566 18/60 (30%)
leucine-rich repeat 327..348 CDD:275380 4/20 (20%)
leucine-rich repeat 352..375 CDD:275380 10/23 (43%)
leucine-rich repeat 376..401 CDD:275380 4/24 (17%)
leucine-rich repeat 426..450 CDD:275378 6/23 (26%)
LRR_RI <448..651 CDD:238064 52/202 (26%)
leucine-rich repeat 451..474 CDD:275380 5/22 (23%)
LRR_8 473..559 CDD:290566 18/85 (21%)
leucine-rich repeat 475..524 CDD:275380 10/48 (21%)
leucine-rich repeat 500..519 CDD:275380 2/18 (11%)
leucine-rich repeat 525..548 CDD:275380 4/22 (18%)
leucine-rich repeat 549..574 CDD:275380 7/24 (29%)
LRR_8 573..633 CDD:290566 21/59 (36%)
leucine-rich repeat 575..598 CDD:275380 10/22 (45%)
leucine-rich repeat 599..622 CDD:275380 8/22 (36%)
LRR_8 622..683 CDD:290566 12/60 (20%)
leucine-rich repeat 623..646 CDD:275380 6/22 (27%)
leucine-rich repeat 647..730 CDD:275380 12/82 (15%)
leucine-rich repeat 648..673 CDD:275380 4/24 (17%)
leucine-rich repeat 674..705 CDD:275380 1/30 (3%)
LRR_8 704..763 CDD:290566 15/58 (26%)
leucine-rich repeat 731..754 CDD:275380 3/22 (14%)
LRR_8 753..813 CDD:290566 16/59 (27%)
leucine-rich repeat 755..778 CDD:275380 7/22 (32%)
leucine-rich repeat 779..802 CDD:275380 5/22 (23%)
leucine-rich repeat 803..823 CDD:275380 8/35 (23%)
leucine-rich repeat 852..876 CDD:275380 5/23 (22%)
LRR_8 854..910 CDD:290566 14/106 (13%)
LRR_RI <877..>1006 CDD:238064 29/180 (16%)
leucine-rich repeat 877..900 CDD:275380 5/68 (7%)
leucine-rich repeat 901..925 CDD:275380 6/28 (21%)
leucine-rich repeat 926..946 CDD:275380 3/19 (16%)
LRR_8 947..1004 CDD:290566 12/57 (21%)
leucine-rich repeat 947..970 CDD:275380 3/23 (13%)
leucine-rich repeat 971..993 CDD:275380 4/21 (19%)
LRR_8 992..1049 CDD:290566 21/57 (37%)
leucine-rich repeat 994..1014 CDD:275380 10/19 (53%)
leucine-rich repeat 1019..1042 CDD:275380 8/22 (36%)
Toll-6NP_001246765.1 leucine-rich repeat 148..171 CDD:275380 6/23 (26%)
LRR_8 171..236 CDD:290566 20/65 (31%)
leucine-rich repeat 172..201 CDD:275380 7/28 (25%)
leucine-rich repeat 202..278 CDD:275380 20/87 (23%)
leucine-rich repeat 229..249 CDD:275380 3/19 (16%)
LRR_RI 278..468 CDD:238064 56/218 (26%)
leucine-rich repeat 279..302 CDD:275380 11/45 (24%)
LRR_8 301..386 CDD:290566 27/94 (29%)
leucine-rich repeat 303..326 CDD:275380 5/22 (23%)
leucine-rich repeat 327..350 CDD:275380 10/22 (45%)
LRR 350..729 CDD:227223 100/450 (22%)
leucine-rich repeat 352..375 CDD:275380 4/24 (17%)
leucine-rich repeat 376..401 CDD:275380 7/24 (29%)
LRR_RI <401..626 CDD:238064 60/231 (26%)
leucine-rich repeat 402..425 CDD:275380 6/23 (26%)
leucine-rich repeat 426..449 CDD:275380 5/22 (23%)
leucine-rich repeat 450..473 CDD:275380 7/24 (29%)
leucine-rich repeat 474..497 CDD:275380 3/22 (14%)
leucine-rich repeat 498..518 CDD:275380 4/20 (20%)
leucine-rich repeat 521..544 CDD:275380 7/24 (29%)
leucine-rich repeat 545..566 CDD:275380 8/20 (40%)
leucine-rich repeat 569..592 CDD:275380 8/22 (36%)
leucine-rich repeat 593..615 CDD:275380 6/22 (27%)
leucine-rich repeat 616..637 CDD:275380 6/57 (11%)
leucine-rich repeat 638..662 CDD:275380 9/36 (25%)
leucine-rich repeat 663..684 CDD:275380 6/20 (30%)
leucine-rich repeat 685..708 CDD:275380 5/22 (23%)
leucine-rich repeat 709..728 CDD:275380 4/18 (22%)
LRR_8 883..943 CDD:290566 16/81 (20%)
leucine-rich repeat 885..908 CDD:275380 5/36 (14%)
leucine-rich repeat 909..932 CDD:275380 5/29 (17%)
LRR_8 932..990 CDD:290566 21/56 (38%)
leucine-rich repeat 933..956 CDD:275380 10/22 (45%)
TIR 1114..1247 CDD:214587
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45453811
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.