DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment chp and Toll-7

DIOPT Version :10

Sequence 1:NP_001263137.1 Gene:chp / 43690 FlyBaseID:FBgn0267435 Length:1338 Species:Drosophila melanogaster
Sequence 2:NP_523797.1 Gene:Toll-7 / 37272 FlyBaseID:FBgn0034476 Length:1446 Species:Drosophila melanogaster


Alignment Length:1305 Identity:291/1305 - (22%)
Similarity:477/1305 - (36%) Gaps:400/1305 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   146 SLRHLQKLRHLDL----GYNHITHIQHDSFRGLEDS--------LQTL-ILR-ENC-ISQLMSHS 195
            :||.:::...|||    |.:.:| ||.......|.:        |||| .|| ::| :.||.:::
  Fly    90 ALRLIERQPGLDLQGADGSSQLT-IQCSELYLFESTLPVAVFARLQTLEALRLDSCKLLQLPNNA 153

  Fly   196 FSGLLILETLDLSGNN-------LFEIDPNVFVDGMPRLTRLLLTDNILSEIPYDALGPLKSLRT 253
            |.||..|::|.||.:|       ..|:.|: .:.|:.:||.|.|.||.|.::|...|.|:.:|:.
  Fly   154 FEGLATLKSLRLSTHNSEWGPTRTLELFPD-SLGGLKQLTDLDLGDNNLRQLPSGFLCPVGNLQV 217

  Fly   254 LDISHNVIWSL-------------SGNETYEIKASTKLNLDNLHLEYNHIEVLPPNSFKYFDTVN 305
            |:::.|.|.:.             ||:...|::.          |:.:|.|:             
  Fly   218 LNLTRNRIRTAEQMGFADMNCGAGSGSAGSELQV----------LDASHNEL------------- 259

  Fly   306 RTFFDGNPIHTLREDAFKPARIREIYMRYCGLTNISPVAFDSLVNSLQILDLSGNNLTKLHHKLF 370
            |:..:...|..||       |::.:.:.|..|:.:|..|...|. ||:|::||.|:|..|...||
  Fly   260 RSISESWGISRLR-------RLQHLNLAYNNLSELSGEALAGLA-SLRIVNLSNNHLETLPEGLF 316

  Fly   371 NNFDVLRVISMRDNKIKIQKPTETFNAVHYTLLKLDLSGDRNDPTNLQTLRKMRNMRSLSISRLG 435
            .....||.|.::.|:: .:.|...|:.:. .||.:||||                      ::|.
  Fly   317 AGSKELREIHLQQNEL-YELPKGLFHRLE-QLLVVDLSG----------------------NQLT 357

  Fly   436 SSSVGPEDFKDFGVELEDLQITRASLSGIQSHAFKHVRGLKRLDFSENGISSIENDAFHEIGHSL 500
            |:.|....|... :.|..|.:...:|:.|....||.:..|:.|:...|.|..||::||       
  Fly   358 SNHVDNTTFAGL-IRLIVLNLAHNALTRIDYRTFKELYFLQILNLRNNSIGHIEDNAF------- 414

  Fly   501 ISLKMSHGYSGSALPAEPLRHLTSLQELDFSNNHISSMSDTSFHFLKNLRLLELHDNRIEQVLKG 565
                         ||      |.:|..|:.:.|.:.::.|..|:.|..|..|.|::|.|..|...
  Fly   415 -------------LP------LYNLHTLNLAENRLHTLDDKLFNGLYVLSKLTLNNNLISVVEPA 460

  Fly   566 TFQGDIHSKLEEISLRFNHLTSISQHTFFDLEALRKLHLDDNKIDKIERRAFMNLDELEYLSLRG 630
            .|:.  .|.|:|:.|..|.|..:.: ...||..||.|.|.:|:|...:.::|.||.:|..|.|..
  Fly   461 VFKN--CSDLKELDLSSNQLNEVPR-ALQDLAMLRTLDLGENQIRTFDNQSFKNLHQLTGLRLID 522

  Fly   631 NKINNLADESFQNLPKLEILDMAFNQLPNFNFDYFDQ--------------------VGTL-SNL 674
            |:|.|:....||:||:|.:|::|.|::.:.....||:                    ..|| |.|
  Fly   523 NQIGNITVGMFQDLPRLSVLNLAKNRIQSIERGSFDKNFELEAIRLDRNFLADINGVFATLVSLL 587

  Fly   675 NVNVSHNQIRQLMY-----NSSWSGRNEHG------GMYHS-----NIKILDLSHNNISIIHPGY 723
            .:|:|.|.:....|     |..|  .:.||      |.|:.     .:|.||.|||.|:.|.|..
  Fly   588 WLNLSENHLVWFDYAFIPSNLKW--LDIHGNYIEALGNYYKLQEEIRVKTLDASHNRITEIGPMS 650

  Fly   724 FRPAEISLTHLHLGYNSLMNTTRDVFGNMPHLQWLDLSYNWIHELDFDAFK-----NTKQLQLVF 783
            . |..|.|  |.:..|.:.|...:.|.:..:|..:||..|.:.:|.....:     ..|.|...:
  Fly   651 I-PNTIEL--LFINNNLIGNVQPNAFVDKANLARVDLYANQLSKLQLQQLRVAPVVAPKPLPEFY 712

  Fly   784 FGHN-YLSDIPQD--------------------------------IFKPVQGLRIVDF-----SH 810
            .|.| :..|...|                                ..:|:.|||..||     ||
  Fly   713 LGGNPFECDCTMDWLQRINNLTTRQHPRVMDMANIECVMPHARGAAVRPLSGLRPQDFLCRYESH 777

  Fly   811 -------------------------------------------------------------NHLR 814
                                                                         |:..
  Fly   778 CFALCHCCDFDACDCEMTCPSNCTCYHDQIWSTNVVDCGGQQTTELPRRVPMDSSVVYLDGNNFP 842

  Fly   815 GLPDNLFY-NGGMEKLDVSHNMMLKIPSSSLSSLAALTLCELHLSNNFISTIHSMDLSNKFRSLR 878
            .|.::.|. ...:..|.|:.:.:..|.:.:.:|||:|.|  |||::|.:.|:|..:. .:..:||
  Fly   843 VLKNHAFIGRKNLRALYVNGSQVAAIQNRTFASLASLQL--LHLADNKLRTLHGYEF-EQLSALR 904

  Fly   879 YLDISYNYLLRIDDAVFATMPKLAVLDLSHNRDLKV----MDKSFMGLENSLIKLGLENISLSTV 939
            .|.:..|.|..|::|..|.:..|.::.:..||.:.:    |..:..|.....|.||....|    
  Fly   905 ELYLQNNQLTTIENATLAPLAALELIRIDGNRLVTLPIWQMHATHFGTRLKSISLGRNQWS---- 965

  Fly   940 PEIRLKYLREFRLGYNELPSIPQE-----------------LAHNMSNLRMLDLSNNDL------ 981
              .|.::|:.......:...|.|:                 |..:.||...|:....|.      
  Fly   966 --CRCQFLQALTSYVADNALIVQDAQDIYCMAASSGTGSAALEDSSSNSGSLEKRELDFNATGAA 1028

  Fly   982 -----------------TNVPLMTQALPHLRRLMLSGNPITSLNNNSFDGVNEDLEMLDISNFRL 1029
                             :.:||:..||..|..|::.....         ...|.|.:...:::.:
  Fly  1029 CTDYYSGGSMLQHGIPESYIPLLAAALALLFLLVVIAMVF---------AFRESLRIWLFAHYGV 1084

  Fly  1030 HYFEYGCLDS-----LPHLRSLKLTAY--SH---------------LEHFNIPHLLRHHYNIRQL 1072
            ..|...|.:|     ...|.|.|.:.:  .|               |:|.::.|...|:    ||
  Fly  1085 RVFGPRCEESEKLYDAVLLHSAKDSEFVCQHLAAQLETGRPPLRVCLQHRDLAHDATHY----QL 1145

  Fly  1073 WIEAPQPFTRIVKKGSGPTQEMQTLQLGN-------PTDLQREMEGHL---PSKLTNITFSGPQF 1127
             :||.:...|:|           .|...|       ..:|:|.:...|   |.||..|......|
  Fly  1146 -LEATRVSRRVV-----------ILLTRNFLQTEWARCELRRSVHDALRGRPQKLVIIEEPEVAF 1198

  Fly  1128 -------------TNLNERILRGMRSPYLYMQLFNTSLQALPPNFFKYMGRVRNISLDIRYHNRN 1179
                         |:...||.|..|      ..:.....|||.::..:.|  .|.:|::.:||..
  Fly  1199 EAESDIELLPYLKTSAVHRIRRSDR------HFWEKLRYALPVDYPTFRG--NNYTLELDHHNHE 1255

  Fly  1180 LKKIP 1184
            ..|.|
  Fly  1256 RVKQP 1260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
chpNP_001263137.1 LRR <84..320 CDD:443914 54/208 (26%)
leucine-rich repeat 84..103 CDD:275380
leucine-rich repeat 104..128 CDD:275380
leucine-rich repeat 129..152 CDD:275380 2/5 (40%)
leucine-rich repeat 153..177 CDD:275380 8/27 (30%)
leucine-rich repeat 178..201 CDD:275380 12/25 (48%)
leucine-rich repeat 202..226 CDD:275380 8/30 (27%)
leucine-rich repeat 227..250 CDD:275380 10/22 (45%)
leucine-rich repeat 251..279 CDD:275380 7/40 (18%)
leucine-rich repeat 280..326 CDD:275380 7/45 (16%)
leucine-rich repeat 327..348 CDD:275380 4/20 (20%)
leucine-rich repeat 352..375 CDD:275380 9/22 (41%)
PPP1R42 355..564 CDD:455733 52/208 (25%)
leucine-rich repeat 376..401 CDD:275380 6/24 (25%)
leucine-rich repeat 426..450 CDD:275378 4/23 (17%)
leucine-rich repeat 451..474 CDD:275380 6/22 (27%)
LRR_8 473..559 CDD:404697 21/85 (25%)
leucine-rich repeat 475..524 CDD:275380 11/48 (23%)
leucine-rich repeat 500..519 CDD:275380 2/18 (11%)
leucine-rich repeat 525..548 CDD:275380 6/22 (27%)
LRR <540..>834 CDD:443914 97/435 (22%)
leucine-rich repeat 549..574 CDD:275380 7/24 (29%)
leucine-rich repeat 575..598 CDD:275380 7/22 (32%)
leucine-rich repeat 599..622 CDD:275380 9/22 (41%)
leucine-rich repeat 623..646 CDD:275380 9/22 (41%)
leucine-rich repeat 647..730 CDD:275380 30/119 (25%)
leucine-rich repeat 648..673 CDD:275380 7/45 (16%)
leucine-rich repeat 674..705 CDD:275380 11/46 (24%)
LRR <730..1081 CDD:443914 90/521 (17%)
leucine-rich repeat 731..754 CDD:275380 5/22 (23%)
leucine-rich repeat 755..778 CDD:275380 5/27 (19%)
leucine-rich repeat 779..802 CDD:275380 6/55 (11%)
leucine-rich repeat 803..823 CDD:275380 9/86 (10%)
leucine-rich repeat 852..876 CDD:275380 7/23 (30%)
leucine-rich repeat 877..900 CDD:275380 8/22 (36%)
leucine-rich repeat 901..925 CDD:275380 5/27 (19%)
leucine-rich repeat 926..946 CDD:275380 5/19 (26%)
leucine-rich repeat 947..970 CDD:275380 4/39 (10%)
leucine-rich repeat 971..993 CDD:275380 6/44 (14%)
leucine-rich repeat 994..1014 CDD:275380 2/19 (11%)
leucine-rich repeat 1019..1042 CDD:275380 4/27 (15%)
Toll-7NP_523797.1 LRR 45..473 CDD:443914 119/468 (25%)
leucine-rich repeat 136..159 CDD:275380 9/22 (41%)
leucine-rich repeat 160..190 CDD:275380 8/30 (27%)
leucine-rich repeat 191..214 CDD:275380 10/22 (45%)
leucine-rich repeat 215..248 CDD:275380 6/32 (19%)
leucine-rich repeat 249..273 CDD:275380 7/53 (13%)
leucine-rich repeat 274..297 CDD:275380 5/23 (22%)
leucine-rich repeat 298..321 CDD:275380 9/22 (41%)
leucine-rich repeat 322..345 CDD:275380 6/24 (25%)
leucine-rich repeat 346..371 CDD:275380 10/47 (21%)
LRR 369..>675 CDD:443914 93/340 (27%)
leucine-rich repeat 372..395 CDD:275380 6/22 (27%)
leucine-rich repeat 396..419 CDD:275380 11/48 (23%)
leucine-rich repeat 420..443 CDD:275380 6/22 (27%)
leucine-rich repeat 444..467 CDD:275380 7/24 (29%)
leucine-rich repeat 468..488 CDD:275380 5/20 (25%)
leucine-rich repeat 491..514 CDD:275380 9/22 (41%)
leucine-rich repeat 515..536 CDD:275380 8/20 (40%)
leucine-rich repeat 539..562 CDD:275380 6/22 (27%)
leucine-rich repeat 563..585 CDD:275380 2/21 (10%)
leucine-rich repeat 586..626 CDD:275380 11/41 (27%)
leucine-rich repeat 627..653 CDD:275380 9/26 (35%)
LRRCT 716..772 CDD:214507 9/55 (16%)
LRR <812..>963 CDD:443914 33/153 (22%)
leucine-rich repeat 812..829 CDD:275380 0/16 (0%)
leucine-rich repeat 833..854 CDD:275380 3/20 (15%)
leucine-rich repeat 855..878 CDD:275380 5/22 (23%)
leucine-rich repeat 879..902 CDD:275380 8/25 (32%)
leucine-rich repeat 903..926 CDD:275380 8/22 (36%)
leucine-rich repeat 927..953 CDD:275380 5/25 (20%)
TIR 1098..1235 CDD:214587 31/158 (20%)
Blue background indicates that the domain is not in the aligned region.

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