DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment chp and cyr1

DIOPT Version :9

Sequence 1:NP_001263137.1 Gene:chp / 43690 FlyBaseID:FBgn0267435 Length:1338 Species:Drosophila melanogaster
Sequence 2:NP_596159.1 Gene:cyr1 / 2540810 PomBaseID:SPBC19C7.03 Length:1692 Species:Schizosaccharomyces pombe


Alignment Length:1382 Identity:275/1382 - (19%)
Similarity:501/1382 - (36%) Gaps:415/1382 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 FPALPRMVNQSKVFMLHMENTGLREIEPYFLQSTGMYRLKIS-----GNHLTEIPDDAFTGLERS 128
            :|:.|.:.::|.:|..:..:      |.:.|..||..:...:     .:..:|:|.|.     ||
pombe    80 YPSTPAVPSKSVLFHFYEPD------ENFSLSDTGRTKSDTALAARESSEKSEVPRDT-----RS 133

  Fly   129 LWELILPQNDLVEIPSKSLRHLQKL---------RHLDLGYNHITH---IQHDSFRGLEDSLQTL 181
            .......:|:...........|::|         ::|:..:.::|.   |..||     ||::  
pombe   134 AGIKPYKENNSSNCAISKEAGLRRLIDKDRESFDKNLNQSFTNLTFPEPISDDS-----DSVE-- 191

  Fly   182 ILRENCISQLMSHSFSGLLILETLDLSGNNLFEIDPNVFVDGMPRLTRLLLTDNILSEIPYDALG 246
             .:.:.::.....|..|            ::.|:..|...||:|.....:| |.......||:  
pombe   192 -FQRDSLNNNWPASLEG------------SIHELPRNSDDDGIPASAAHIL-DLDYHRDSYDS-- 240

  Fly   247 PLKSLRTLDISHNVIWSLSGNETYEIKASTKLNLDNLHLEYNHIEVLPPNSFKYFDTVNRTFFD- 310
            |.|......       |:..:::::...|...:|..        |.:|...|      ...||. 
pombe   241 PWKKFLPYP-------SILSDDSWKAPESWGTSLPT--------EAIPKQVF------TTRFFAR 284

  Fly   311 ---GNPIHTLREDAFKPARIREIYMRY-----CGLTNISPVAFDSLVNSLQILDLSGNNLTKLHH 367
               ||             |.:|.::|.     ..::.|.|:...:            :.:.||..
pombe   285 PSLGN-------------RKKEFFLRVYRDDRTSVSFICPIGIQT------------HEVIKLLA 324

  Fly   368 KLF-----NNFDVLRVISMRDNKIKIQKPTETFNAVHYTLLKL---DLSGDR--NDPTNLQTLRK 422
            :||     .||.:|.:   :.|..:|..|.|....:...||.|   .::.|.  |:..|      
pombe   325 RLFFLPSSANFYLLLI---QFNTERILLPHEQPCIIFERLLSLFGCKVTSDEEINEEDN------ 380

  Fly   423 MRNMRSLSISRL--GSSSVGPEDFKDFGVE--LEDLQITRASLSGIQSHAFKHVRGLKRLDFSEN 483
                  .|::||  .:..:|.:..:.|..:  ..:|.|:|::|..|....:.:            
pombe   381 ------YSVARLVFTTMDIGADVLRKFSEKKITANLDISRSNLEVIPVKIYPY------------ 427

  Fly   484 GISSIENDAFHEIGHSLISLKMSHGYSGSALPAEPLRHLTSLQELDFSNNHISSMSDTSFHFLKN 548
                         .|.||||.:||..| ..||.:.:.....|:.||.||| :.|........|:.
pombe   428 -------------AHELISLNVSHNLS-LDLPLDFMERCVKLKRLDISNN-LRSPRGKPITALRQ 477

  Fly   549 LRLLELHDNRIEQVLKGTFQGDIHSKLEEISLRFNHLTSISQHTFF------------------- 594
            |.:|.:..|.|.::....|.|...:.|:|:::..|.|..:...|.:                   
pombe   478 LEVLNMSRNDIYELDPLIFSGLSRNSLKELNIANNKLFFLPHSTRYLVNLTYLDLSYNNFVTFPL 542

  Fly   595 ---DLEALRKLHLDDNKIDKIERRAFMNLDELEYLSLRGNKINNLADESFQNLPKLEILDMAFNQ 656
               :|..|..|:...|.:.:|..: ..:|.:|::|.|:.|.::|...:....|..||.:|:::|.
pombe   543 IITELSQLETLNFSHNLLSQISSK-IGSLVKLKHLYLQFNDLSNRLPQEIGLLKNLETIDLSYNA 606

  Fly   657 LPNFNFDYFDQVGTLS---NLN-VNVSHNQIRQLMYNSSWSGRNEHGGMYHSNIKILDLSHNNIS 717
            :.|        :.:||   .|| :||:.|.:....|:             :.:...:|.|...::
pombe   607 ITN--------IASLSECPKLNSINVACNLLSFYEYS-------------NPSATFIDFSFCPLT 650

  Fly   718 IIHPGYFRPAEISLTHLHLGYNSLMNTTRDVFGNMPHLQWLDLSYNWIHELD--FDAFKNTKQLQ 780
            .|.|.:   :..:|.:..:.:..|:.....|...:.:::.:.::||....:.  ..|.:|.|.|.
pombe   651 TIDPAF---SYSNLVYFDISHAKLIGLKDSVIETLVNVETVKVNYNHFTSISDAISAMQNLKYLS 712

  Fly   781 LVFFGHNYLSDIPQDIFKPVQGLRIVDFSHNHLRGLPDNLFYNGGMEKLDVSHNMM--LKIPSSS 843
            ......:|:|  |.  ...::.|..:|...|:::..|:.::....::.:::|.|::  :|:|.::
pombe   713 CTNCEMSYVS--PN--LGKLKHLVHLDLHANNIKIFPEEVWQVSSLKVVNLSSNILEKIKLPVAT 773

  Fly   844 LSSLAALTLCELH----LSNNFISTIHSMD---------------LSNK-------FRSLRYLDI 882
            ...|.. |:.:|.    ||.|.:|::.|.:               |.|.       |:.|:.|::
pombe   774 SKKLTR-TISQLKIMRTLSGNPVSSLSSQEFVMPTVEELYLVDNRLGNDCFTALEYFKCLKVLNL 837

  Fly   883 SYNYLLRIDDAVFATMPKLAVLDLSHNRDLKVMDKSFMGLENSLIKLGLENISLSTVPEIRLKYL 947
            |||||..|....|.....|..|.:|.|.                    |.|:|:|:..::.|:.|
pombe   838 SYNYLTEIPSKFFQNFSDLKHLFVSGNE--------------------LANLSISSTAQVLLETL 882

  Fly   948 REFRLGYNELPSIPQELAHNMSNLRMLDLSNNDLTNVPL-------MTQALPHLRRLMLSGNPIT 1005
              :..| |.|.|.|:..|.:.| ||.||:|.|:|.|:.:       :|: ||.|..|.||||  |
pombe   883 --YANG-NRLSSFPKNEALSKS-LRFLDISTNNLQNLAVEKAEKKSLTK-LPQLEYLNLSGN--T 940

  Fly  1006 SLNNNSFDGVN------EDLEMLDISNFR----------LHYF-----------EYGCLD----S 1039
            ....:..:..|      ::|:.|.|.:..          |::|           .||...    |
pombe   941 WFRFSEHEDTNFTKSYLKNLKFLSIMDLNTKFSNAPSDVLNHFIQRNSPQPNILRYGVCGYLSRS 1005

  Fly  1040 LPHLRSLKLTAYSHLE-------------------------HFNIPHLLRHHYNI-----RQLWI 1074
            :|.:.:.:|...:.|.                         :.|:...|.|..|.     .|:..
pombe  1006 IPVISACELVVNNFLHPQSSLYCVLDSDISAGKNNRVLKFVYDNLASCLAHEINAADSSSEQICN 1070

  Fly  1075 EAPQPFTRIVKKGSGPTQEMQTLQLGNPT--DLQREMEGHLPSKLTNITFSGPQFTNLNER---- 1133
            ...:.|.|:.||            |||..  ||::..||.:.|.....       .|::|:    
pombe  1071 ALRRGFLRLNKK------------LGNVIHYDLRKSSEGDVDSNYVTT-------MNISEKGYSM 1116

  Fly  1134 -----------ILRGMRSPYLYMQLFNTSLQAL------PPNFFKYMGRVRN------------- 1168
                       ||..:|....::....||:..:      .|.....|..|.|             
pombe  1117 DSSCLDIGVSIILVYVRDTRAFVANVGTSMAIMSTRNDSEPTTLSVMHDVYNRDEIRRIVDSCGF 1181

  Fly  1169 ISLDIR-YHNRNLKKIPN-PNTGAVPYLPNSVFLTDLKMSHTDLNCDCDLGWVEFWQRKRRQYIC 1231
            ||.:|: ...|.:.::.. |...||||: |..:|       ::||....|...|||.      :.
pombe  1182 ISGEIKSTTTRAIGRLSQFPGVQAVPYV-NVQYL-------SELNEFIILANQEFWS------VL 1232

  Fly  1232 SSQTWTDTVFRTFMNSP 1248
            |.:|..|.| |...:||
pombe  1233 SKRTVIDVV-RANRHSP 1248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
chpNP_001263137.1 leucine-rich repeat 84..103 CDD:275380 2/18 (11%)
LRR_8 102..163 CDD:290566 11/74 (15%)
leucine-rich repeat 104..128 CDD:275380 3/28 (11%)
LRR_RI <128..261 CDD:238064 24/144 (17%)
leucine-rich repeat 129..152 CDD:275380 2/22 (9%)
LRR_8 152..212 CDD:290566 10/71 (14%)
leucine-rich repeat 153..177 CDD:275380 6/35 (17%)
leucine-rich repeat 178..201 CDD:275380 2/22 (9%)
LRR_8 202..261 CDD:290566 11/58 (19%)
leucine-rich repeat 202..226 CDD:275380 4/23 (17%)
leucine-rich repeat 227..250 CDD:275380 5/22 (23%)
leucine-rich repeat 251..279 CDD:275380 2/27 (7%)
leucine-rich repeat 280..326 CDD:275380 8/49 (16%)
LRR_8 326..386 CDD:290566 13/69 (19%)
leucine-rich repeat 327..348 CDD:275380 4/25 (16%)
leucine-rich repeat 352..375 CDD:275380 6/27 (22%)
leucine-rich repeat 376..401 CDD:275380 5/24 (21%)
leucine-rich repeat 426..450 CDD:275378 5/25 (20%)
LRR_RI <448..651 CDD:238064 48/226 (21%)
leucine-rich repeat 451..474 CDD:275380 5/22 (23%)
LRR_8 473..559 CDD:290566 21/85 (25%)
leucine-rich repeat 475..524 CDD:275380 10/48 (21%)
leucine-rich repeat 500..519 CDD:275380 9/18 (50%)
leucine-rich repeat 525..548 CDD:275380 8/22 (36%)
leucine-rich repeat 549..574 CDD:275380 6/24 (25%)
LRR_8 573..633 CDD:290566 15/81 (19%)
leucine-rich repeat 575..598 CDD:275380 6/44 (14%)
leucine-rich repeat 599..622 CDD:275380 5/22 (23%)
LRR_8 622..683 CDD:290566 18/64 (28%)
leucine-rich repeat 623..646 CDD:275380 6/22 (27%)
leucine-rich repeat 647..730 CDD:275380 17/86 (20%)
leucine-rich repeat 648..673 CDD:275380 6/27 (22%)
leucine-rich repeat 674..705 CDD:275380 6/31 (19%)
LRR_8 704..763 CDD:290566 7/58 (12%)
leucine-rich repeat 731..754 CDD:275380 3/22 (14%)
LRR_8 753..813 CDD:290566 12/61 (20%)
leucine-rich repeat 755..778 CDD:275380 4/24 (17%)
leucine-rich repeat 779..802 CDD:275380 4/22 (18%)
leucine-rich repeat 803..823 CDD:275380 4/19 (21%)
leucine-rich repeat 852..876 CDD:275380 9/49 (18%)
LRR_8 854..910 CDD:290566 21/81 (26%)
LRR_RI <877..>1006 CDD:238064 43/135 (32%)
leucine-rich repeat 877..900 CDD:275380 9/22 (41%)
leucine-rich repeat 901..925 CDD:275380 4/23 (17%)
leucine-rich repeat 926..946 CDD:275380 5/19 (26%)
LRR_8 947..1004 CDD:290566 25/63 (40%)
leucine-rich repeat 947..970 CDD:275380 7/22 (32%)
leucine-rich repeat 971..993 CDD:275380 10/28 (36%)
LRR_8 992..1049 CDD:290566 18/87 (21%)
leucine-rich repeat 994..1014 CDD:275380 7/19 (37%)
leucine-rich repeat 1019..1042 CDD:275380 8/47 (17%)
cyr1NP_596159.1 Ad_cyc_g-alpha 155..200 CDD:129025 9/52 (17%)
UBQ 292..387 CDD:294102 23/121 (19%)
leucine-rich repeat 409..430 CDD:275380 5/45 (11%)
leucine-rich repeat 431..454 CDD:275380 9/23 (39%)
LRR_RI <441..616 CDD:238064 41/185 (22%)
leucine-rich repeat 455..477 CDD:275380 8/22 (36%)
LRR_8 476..537 CDD:290566 11/60 (18%)
leucine-rich repeat 478..503 CDD:275380 6/24 (25%)
leucine-rich repeat 504..526 CDD:275380 5/21 (24%)
leucine-rich repeat 527..549 CDD:275380 1/21 (5%)
LRR_8 548..607 CDD:290566 15/59 (25%)
leucine-rich repeat 550..572 CDD:275380 5/22 (23%)
leucine-rich repeat 573..596 CDD:275380 6/22 (27%)
leucine-rich repeat 597..618 CDD:275380 7/28 (25%)
leucine-rich repeat 661..684 CDD:275380 3/22 (14%)
leucine-rich repeat 685..707 CDD:275380 3/21 (14%)
leucine-rich repeat 708..730 CDD:275380 5/25 (20%)
LRR_RI <724..941 CDD:238064 62/246 (25%)
leucine-rich repeat 754..783 CDD:275380 6/29 (21%)
leucine-rich repeat 784..807 CDD:275380 6/22 (27%)
leucine-rich repeat 808..831 CDD:275380 3/22 (14%)
LRR_8 832..889 CDD:290566 21/79 (27%)
leucine-rich repeat 832..855 CDD:275380 9/22 (41%)
leucine-rich repeat 856..877 CDD:275380 8/40 (20%)
leucine-rich repeat 879..901 CDD:275380 8/24 (33%)
leucine-rich repeat 902..930 CDD:275380 10/28 (36%)
PP2C 1032..1268 CDD:278884 52/251 (21%)
CYCc 1300..1488 CDD:214485
Nucleotidyl_cyc_III 1323..1519 CDD:299850
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
21.870

Return to query results.
Submit another query.