DRSC/TRiP Functional Genomics Resources

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Protein Alignment chp and si:dkey-182i3.11

DIOPT Version :9

Sequence 1:NP_001263137.1 Gene:chp / 43690 FlyBaseID:FBgn0267435 Length:1338 Species:Drosophila melanogaster
Sequence 2:XP_021322095.1 Gene:si:dkey-182i3.11 / 100334238 ZFINID:ZDB-GENE-121214-258 Length:710 Species:Danio rerio


Alignment Length:808 Identity:214/808 - (26%)
Similarity:333/808 - (41%) Gaps:175/808 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LTITLMIMIWMSLARASMFDREMEETHYPPCTYNVMCTCSKSSTDLGIVHCKN---VPFPALPRM 75
            |.||.:.|.|..|....:.      .....|.  :.|:|    .|:.||.|.|   :.||.||  
Zfish    31 LQITSLRMFWPLLIILDLI------AAVDACP--ISCSC----VDVDIVTCWNTNLLEFPPLP-- 81

  Fly    76 VNQSKVFMLHMENTGLREIEPYFLQSTGMYRLKISGNHLTEIPDDAF-----TGLERSLWELILP 135
             |.:|.|                      |..:   |.:..:|::.|     ..|.::::.|.|.
Zfish    82 -NGTKHF----------------------YATR---NKIQALPNETFHELRVLDLTKNVFNLSLN 120

  Fly   136 QNDLVEIPSKSLRHLQKLRHLDLGYNHITHIQHDSFRGLEDSLQTLILRENCISQLMSHSFSGLL 200
            .|         .:.::.|.||.||.|.:..:....|.||. :||.|.|..|.|..|......||:
Zfish   121 TN---------WQSVRGLTHLHLGGNRLRALTPRQFEGLL-NLQVLDLSNNAIKSLPQMFLYGLI 175

  Fly   201 ILETLDLSGNNLFEIDPNVFVDGMPRLTRLLLTDNILSEIPYDALGPLKSLRTLDISHNVIWSLS 265
            .|:||:|:.|.:..:...| ::|...||.|.|.||::..|..:.......|..|.:|.|.:.|: 
Zfish   176 NLQTLNLNINQILSLSYGV-LEGPLALTDLQLRDNMIDMIEMNVFENCTYLAKLYLSKNKLKSV- 238

  Fly   266 GNETYEIKASTKLNLDNLHLEYNHIEVLPPNSFKYFDTVNRTFFDGNPIHTLREDAFKP-ARIRE 329
            ||.::  |.:|.||  :|.|..|.:..:|....:....:...:...|.|.::.::.|.. ..::.
Zfish   239 GNGSF--KGATGLN--HLDLGLNGLAGIPTIVLQETSNLTSLYLQKNDITSIPDNVFSEILSLKH 299

  Fly   330 IYMRYCGLTNISPVAFDSLVNSLQILDLSGNNLTKLHHKLFNNFDVLRVISMRDNKIKIQKPTET 394
            :.:.|.||.:||..:|.|| :.|..||||.|.|..|...:|.:...|                |.
Zfish   300 LDLSYNGLVSISNGSFRSL-SQLVYLDLSFNQLQTLTQHVFEDLGKL----------------EN 347

  Fly   395 FNAVHYTLLKLDLSGDRNDPTNLQTLRKMRNMRSLSISRLGSSSVGPEDFKDFGVELEDLQITRA 459
            .|..|..|..|        |.|:  .:.:..::.|.:.....|.:.|:.|..... |:|||:...
Zfish   348 LNLYHNKLTSL--------PNNM--FKNLTMLKELQLDSNNISVIPPDLFHPLSA-LKDLQLDNN 401

  Fly   460 SLSGIQSHAFKHVRGLKRLDFSENGISSIENDAFH----EIG-----------------HSLISL 503
            .:|.:.||.||.:|.||:||.|.|.::.|.|..||    |:.                 |.|.||
Zfish   402 HISKLHSHTFKKLRQLKQLDISSNDLTKIPNHLFHKNLKELNLENNHISFISKFSFKNLHRLQSL 466

  Fly   504 KMSHGYSGSALPAEPLRHLTSLQELDFSNNHISSMSDTSFHFLKNLRLLELHDNRIEQVLKGTFQ 568
            |:||. :.|.|..|.|.:||.|:||..:.|.|.::....|..|:|||:|:|.:|::..:|...| 
Zfish   467 KLSHN-NLSKLYRELLTNLTRLRELLLNENQIETIPVGFFKGLENLRVLDLSNNKMHFILPDAF- 529

  Fly   569 GDIHSKLEEISLRFNHLTSISQHTFFDLEALRKLHLDDNKIDKIERRAFMNLDELEYLSLRGNKI 633
            .|: |.|:::.|.||.|.::.:..|..|..|.||||.:||:..:..|.|..|..||.|.|..|.|
Zfish   530 NDL-SALKDLDLSFNFLHNLPEDIFASLRNLTKLHLQNNKLRYLPSRLFSALVGLEELHLDRNYI 593

  Fly   634 NNLADESFQNLPKLEILDMAFNQLPNFNFDYFDQVGTLSNL----NVNVSHN----QIRQLMYNS 690
            ..:....|:.|.||..|||..|||.:.      :.|||..|    .:::..|    ....::|.|
Zfish   594 QRIHPTQFEGLVKLHELDMKSNQLRSM------EDGTLMPLRKLKRIHLDGNPWDCSTVVILYIS 652

  Fly   691 SWSGRNEHGGMYHSNIKILDLSHNNISIIHPGYFRPAEISLTHLHLGYNSLMNTTRDVFGNMPHL 755
            .|...|.      ..:|...:..:..::.:|..|.             :||:|:.          
Zfish   653 QWFNNNT------QLVKTTPMCSSGQNLSNPALFP-------------SSLLNSA---------- 688

  Fly   756 QWLDLSYNWIHELDFDAFKNTKQLQLVF 783
                         .|.|  |.|||.::|
Zfish   689 -------------CFSA--NIKQLTVLF 701

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
chpNP_001263137.1 leucine-rich repeat 84..103 CDD:275380 0/18 (0%)
LRR_8 102..163 CDD:290566 14/65 (22%)
leucine-rich repeat 104..128 CDD:275380 5/28 (18%)
LRR_RI <128..261 CDD:238064 39/132 (30%)
leucine-rich repeat 129..152 CDD:275380 3/22 (14%)
LRR_8 152..212 CDD:290566 23/59 (39%)
leucine-rich repeat 153..177 CDD:275380 9/23 (39%)
leucine-rich repeat 178..201 CDD:275380 9/22 (41%)
LRR_8 202..261 CDD:290566 18/58 (31%)
leucine-rich repeat 202..226 CDD:275380 7/23 (30%)
leucine-rich repeat 227..250 CDD:275380 7/22 (32%)
leucine-rich repeat 251..279 CDD:275380 9/27 (33%)
leucine-rich repeat 280..326 CDD:275380 7/46 (15%)
LRR_8 326..386 CDD:290566 18/59 (31%)
leucine-rich repeat 327..348 CDD:275380 6/20 (30%)
leucine-rich repeat 352..375 CDD:275380 9/22 (41%)
leucine-rich repeat 376..401 CDD:275380 4/24 (17%)
leucine-rich repeat 426..450 CDD:275378 4/23 (17%)
LRR_RI <448..651 CDD:238064 78/223 (35%)
leucine-rich repeat 451..474 CDD:275380 9/22 (41%)
LRR_8 473..559 CDD:290566 38/106 (36%)
leucine-rich repeat 475..524 CDD:275380 23/69 (33%)
leucine-rich repeat 500..519 CDD:275380 9/18 (50%)
leucine-rich repeat 525..548 CDD:275380 7/22 (32%)
leucine-rich repeat 549..574 CDD:275380 8/24 (33%)
LRR_8 573..633 CDD:290566 23/59 (39%)
leucine-rich repeat 575..598 CDD:275380 7/22 (32%)
leucine-rich repeat 599..622 CDD:275380 10/22 (45%)
LRR_8 622..683 CDD:290566 21/68 (31%)
leucine-rich repeat 623..646 CDD:275380 8/22 (36%)
leucine-rich repeat 647..730 CDD:275380 19/90 (21%)
leucine-rich repeat 648..673 CDD:275380 9/24 (38%)
leucine-rich repeat 674..705 CDD:275380 6/38 (16%)
LRR_8 704..763 CDD:290566 6/58 (10%)
leucine-rich repeat 731..754 CDD:275380 3/22 (14%)
LRR_8 753..813 CDD:290566 7/31 (23%)
leucine-rich repeat 755..778 CDD:275380 3/22 (14%)
leucine-rich repeat 779..802 CDD:275380 2/5 (40%)
leucine-rich repeat 803..823 CDD:275380
leucine-rich repeat 852..876 CDD:275380
LRR_8 854..910 CDD:290566
LRR_RI <877..>1006 CDD:238064
leucine-rich repeat 877..900 CDD:275380
leucine-rich repeat 901..925 CDD:275380
leucine-rich repeat 926..946 CDD:275380
LRR_8 947..1004 CDD:290566
leucine-rich repeat 947..970 CDD:275380
leucine-rich repeat 971..993 CDD:275380
LRR_8 992..1049 CDD:290566
leucine-rich repeat 994..1014 CDD:275380
leucine-rich repeat 1019..1042 CDD:275380
si:dkey-182i3.11XP_021322095.1 PLN00113 97..>617 CDD:331614 167/566 (30%)
leucine-rich repeat 129..152 CDD:275380 9/23 (39%)
leucine-rich repeat 153..176 CDD:275380 9/22 (41%)
leucine-rich repeat 177..200 CDD:275380 7/23 (30%)
leucine-rich repeat 201..224 CDD:275380 7/22 (32%)
leucine-rich repeat 225..248 CDD:275380 8/25 (32%)
leucine-rich repeat 249..272 CDD:275380 6/24 (25%)
leucine-rich repeat 273..296 CDD:275380 3/22 (14%)
leucine-rich repeat 297..320 CDD:275380 8/23 (35%)
leucine-rich repeat 321..344 CDD:275380 9/22 (41%)
leucine-rich repeat 345..368 CDD:275380 8/48 (17%)
leucine-rich repeat 369..392 CDD:275380 4/22 (18%)
leucine-rich repeat 393..438 CDD:275380 20/44 (45%)
leucine-rich repeat 417..436 CDD:275380 8/18 (44%)
leucine-rich repeat 439..462 CDD:275380 1/22 (5%)
leucine-rich repeat 463..486 CDD:275380 11/23 (48%)
leucine-rich repeat 487..510 CDD:275380 7/22 (32%)
leucine-rich repeat 511..534 CDD:275380 8/24 (33%)
leucine-rich repeat 535..558 CDD:275380 7/22 (32%)
leucine-rich repeat 559..582 CDD:275380 10/22 (45%)
leucine-rich repeat 583..606 CDD:275380 8/22 (36%)
leucine-rich repeat 607..628 CDD:275380 10/26 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BFMX
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D299282at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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