DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1544 and AT3G55410

DIOPT Version :9

Sequence 1:NP_651849.1 Gene:CG1544 / 43689 FlyBaseID:FBgn0039827 Length:919 Species:Drosophila melanogaster
Sequence 2:NP_001327477.1 Gene:AT3G55410 / 824707 AraportID:AT3G55410 Length:1017 Species:Arabidopsis thaliana


Alignment Length:896 Identity:329/896 - (36%)
Similarity:511/896 - (57%) Gaps:65/896 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 VEAFRQHGHKLAAVNPISIRTSQQEL-QELSPAFYGLQTQEPVR--------TDGLLSGPQVAHN 115
            |.|::.:||..|.::|:.:  .|:|: ::|..|.||....:..|        ..|.:|..:....
plant   125 VRAYQVNGHMKAKLDPLGL--EQREIPEDLDLALYGFTEADLDREFFLGVWQMSGFMSENRPVQT 187

  Fly   116 VAQLEQLLKDIYCGRSTSAEFSYVEDIEEREWLARNFETLDQQQLGKSERCEIAELLIKSQAWDN 180
            :..:...|:..||| :...|:.::.|.::..||....||....:..:..|..|.:.|..|..::|
plant   188 LRSILTRLEQAYCG-NIGFEYMHIADRDKCNWLREKIETPTPWRYNRERREVILDRLAWSTQFEN 251

  Fly   181 FMALKFPTVKRYGGEGAESMLAFFWQLLRDSVQANIEHVVLAMPHRGRTPLQAALLNMRPAKVFR 245
            |:|.|:.|.||:|.||.||::....::...:....:|.:|:.|.||||..:...::.....::|.
plant   252 FLATKWTTAKRFGLEGGESLIPGMKEMFDRAADLGVESIVIGMSHRGRLNVLGNVVRKPLRQIFS 316

  Fly   246 KLSGASEFSEDI--EAMSDVISHFHVS-EQLKILGKKLSFSMVRNPSHLEAANPVAMGKTRSKQQ 307
            :.||.....:::  ....||..|...| ::....|||:..|:|.||||||||:.|.:||||:||.
plant   317 EFSGGIRPVDEVGYTGTGDVKYHLGTSYDRPTRGGKKIHLSLVANPSHLEAADSVVVGKTRAKQY 381

  Fly   308 ARGEGAFGDGSQPFGEHVLNVILHGDAAFAGQGINQECLNMAYVPHFEVGGSLHLIVNNQVGFTT 372
            ...:   .|.::..|     :::|||.:|||||:..|.|:::.:|::..||::|::|||||.|||
plant   382 YSND---LDRTKNLG-----ILIHGDGSFAGQGVVYETLHLSALPNYTTGGTIHIVVNNQVAFTT 438

  Fly   373 PGDRGRSTAYTSDLAKSIQAPVFHVNGDDPEALARVTSLAFRYQREFRKDIFIDLNCFRRWGHNE 437
            ....|||:.|.:|:||::.||:|||||||.||:.....||..:::.|..|:.:||.|:||:||||
plant   439 DPRAGRSSQYCTDVAKALSAPIFHVNGDDVEAVVHACELAAEWRQTFHSDVVVDLVCYRRFGHNE 503

  Fly   438 LDDPTFTNPLVYKIVHQRESVPDLYAQQLAKEQVLSESKAKEMRDEYMKYLGEELALAPAYQPPP 502
            :|:|:||.|.:||::....|...:|.::|.:...:|:.....::::....|.||...:..|.|..
plant   504 IDEPSFTQPKMYKVIKNHPSTLQIYHKKLLECGEVSQQDIDRIQEKVNTILNEEFVASKDYLPKK 568

  Fly   503 -SYFEKQWTNFQLAPSKELTYWDTGLDYSLLHYIGQQSVTFPEDFNIHPHLLKTHVNARLKKLEN 566
             .:....|..|: :|.:.....:||:...:|..:|:...:.||:|..|..:.|.: ..|.:.:|:
plant   569 RDWLSTNWAGFK-SPEQISRVRNTGVKPEILKTVGKAISSLPENFKPHRAVKKVY-EQRAQMIES 631

  Fly   567 GVKIDWSTAEALAIGSLMYQGHNVRISGEDVGRGTFSHRHAMLVDQQTNEMFIPLNSMEGGNGGK 631
            |..:||:.|||||..:|:.:|::||:||:||.||||||||::|.||:|.|.:.||:.:......:
plant   632 GEGVDWALAEALAFATLVVEGNHVRLSGQDVERGTFSHRHSVLHDQETGEEYCPLDHLIMNQDPE 696

  Fly   632 L-ELAHSILSEEAVLGFEYGMAIDNPNNLIIWEAQFGDFANGAQIIIDTFIVSGETKWMESNALV 695
            : .:::|.|||..|||||.|.::::||:|::|||||||||||||:|.|.||.|||.||:....||
plant   697 MFTVSNSSLSEFGVLGFELGYSMESPNSLVLWEAQFGDFANGAQVIFDQFISSGEAKWLRQTGLV 761

  Fly   696 MLLPHGYDGAASEHSSCRIERFLQLCDS-------------KETSADGDSVNVHIVNPTTPAQYY 747
            |||||||||...||||.|:||:||:.|.             |:.    ...|..|||.||||.|:
plant   762 MLLPHGYDGQGPEHSSARLERYLQMSDDNPYVIPDMEPTMRKQI----QECNWQIVNATTPANYF 822

  Fly   748 HVLRRQLARNFRKPLVVVAPKTLLRLPAATSTHEDF----------QPGTLFHNVL---GDTIAK 799
            ||||||:.|:|||||:|:|||.|||.....|...:|          :.||.|..::   .|....
plant   823 HVLRRQIHRDFRKPLIVMAPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNDHSDL 887

  Fly   800 PEQVRKVILCSGKHYYTLAEEREKRQAYDTAILRLESLCPFPIQELQAQLAQYGNVQSFVWSQEE 864
            .|.:|:::|||||.||.|.:||:|..|.|.||.|:|.|||||...:|.:|.:|.|.: .||.|||
plant   888 EEGIRRLVLCSGKVYYELDDERKKVGATDVAICRVEQLCPFPYDLIQRELKRYPNAE-IVWCQEE 951

  Fly   865 HRNMGAWTFVRPRFENLIG-------QQLHYCGRCEAPTPATGIGKVHKRE 908
            ..||||::::.||....:.       :.:.|.||..:...|||....|.:|
plant   952 AMNMGAFSYISPRLWTAMRSVNRGDMEDIKYVGRGPSAATATGFYTFHVKE 1002

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1544NP_651849.1 sucA 35..918 CDD:236499 329/896 (37%)
TPP_E1_OGDC_like 178..449 CDD:238974 106/273 (39%)
Transket_pyr 569..772 CDD:280874 113/216 (52%)
OxoGdeHyase_C 779..917 CDD:293475 52/150 (35%)
AT3G55410NP_001327477.1 sucA 62..1012 CDD:236499 329/896 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0567
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D134699at2759
OrthoFinder 1 1.000 - - FOG0000624
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100311
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.720

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