DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1544 and ogdhb

DIOPT Version :9

Sequence 1:NP_651849.1 Gene:CG1544 / 43689 FlyBaseID:FBgn0039827 Length:919 Species:Drosophila melanogaster
Sequence 2:XP_001338181.2 Gene:ogdhb / 797715 ZFINID:ZDB-GENE-090311-8 Length:1023 Species:Danio rerio


Alignment Length:980 Identity:337/980 - (34%)
Similarity:529/980 - (53%) Gaps:124/980 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 YLALSEAGIAKLPRPQSRCYHSEKGVWGYKPIAQREFQVAEDVRASRNSQANVYRFVEAFRQHGH 68
            |.::...|::.|.:.|:        :.|.:|..::   :.||..|       |...:.|::..||
Zfish    97 YQSVPPMGLSGLSQSQA--------LIGAQPNVEK---LVEDHLA-------VQSLIRAYQIRGH 143

  Fly    69 KLAAVNPISIRTSQQELQELSPA----------FYGLQTQE-------PVRTDGLLSGPQVAHNV 116
            .:|.::|:.|..:  :|....||          ||||:..:       |..|  .:.|.:.|..:
Zfish   144 HVAQLDPLGILDA--DLDSCVPADIITSSDKLGFYGLEETDLDKVFRLPTTT--FIGGSETALPL 204

  Fly   117 AQLEQLLKDIYCGRSTSAEFSYVEDIEEREWLARNFETLDQQQLGKSERCEIAELLIKSQAWDNF 181
            .::...|:..|| :....||.::.|:|:.:|:.:.||.....|....|:..:...:::|..::.|
Zfish   205 REIIHRLEMAYC-QHIGVEFMFINDLEQCQWIRQKFEKPGVMQFTLDEKRTLLARMVRSTRFEEF 268

  Fly   182 MALKFPTVKRYGGEGAESMLAFFWQLLRDSVQANIEHVVLAMPHRGRTPLQAALLNMRPAKVF-- 244
            :..|:.:.||:|.||.||::.....::..|.:..:|:|::.||||||..:.|.::.....::|  
Zfish   269 LQRKWSSEKRFGLEGCESLIPALKTIIDKSSENGVENVIMGMPHRGRLNVLANVIRKELEQIFCQ 333

  Fly   245 --RKLSGASEFSEDIEAMSDVISHFHVS----EQLKILGKKLSFSMVRNPSHLEAANPVAMGKTR 303
              .||..|.|.|.|::        :|:.    ...::..::::.|:|.|||||||.:||..|||:
Zfish   334 FDSKLEAADEGSGDVK--------YHLGMYHRRINRVTERQITLSLVANPSHLEAVDPVVQGKTK 390

  Fly   304 SKQQARGEGAFGDGSQPFGEHVLNVILHGDAAFAGQGINQECLNMAYVPHFEVGGSLHLIVNNQV 368
            ::|...|:   .||::     |::::||||||||||||..|..:::.:|.:...|::|::.|||:
Zfish   391 AEQFYCGD---TDGNR-----VMSILLHGDAAFAGQGIVYETFHLSDLPSYTTHGTIHVVANNQI 447

  Fly   369 GFTTPGDRGRSTAYTSDLAKSIQAPVFHVNGDDPEALARVTSLAFRYQREFRKDIFIDLNCFRRW 433
            ||||.....||:.|.:|:|:.:.||:||||.|||||:..|.::|..::..|.||:.:||..:||.
Zfish   448 GFTTDPRMARSSPYPTDVARVVNAPIFHVNADDPEAVMYVCNVAAEWRATFHKDVVVDLVSYRRN 512

  Fly   434 GHNELDDPTFTNPLVYKIVHQRESVPDLYAQQLAKEQVLSESKAKEMRDEYMKYLGEELALAPAY 498
            ||||:|:|.||.||:||.:.:::.|...||::|..|..::..:.:|...:|.|...|      ||
Zfish   513 GHNEMDEPMFTQPLMYKQIKKQKPVLQKYAEKLIAEGAVTRQEYEEEISKYDKICEE------AY 571

  Fly   499 QPPPS--------YFEKQWTNFQL--APSKELTYWDTGLDYSLLHYIGQQSVTFP-EDFNIHPHL 552
            .....        :.:..|..|..  ...|.::...|||....|.:|||.:.:.| |||.||..|
Zfish   572 NRSKDEKIMHIKHWLDSPWPGFFTLDGQPKTMSCPSTGLSEETLAHIGQTASSVPVEDFTIHGGL 636

  Fly   553 LKTHVNARLKKLENGVKIDWSTAEALAIGSLMYQGHNVRISGEDVGRGTFSHRHAMLVDQQTNE- 616
            .:. :.:|...::|. .:||:..|.:|.|||:.:|.:||:||:||.||||||||.:|.||..:: 
Zfish   637 SRI-LKSRSLMVQNR-SVDWALGEYMAFGSLLKEGIHVRLSGQDVERGTFSHRHHVLHDQNVDKR 699

  Fly   617 MFIPLNSMEGGNGGKLELAHSILSEEAVLGFEYGMAIDNPNNLIIWEAQFGDFANGAQIIIDTFI 681
            ..||:|.|: .|.....:.:|.|||..|||||.|.|:.:||.|::||||||||.|.||.|||.||
Zfish   700 TCIPMNYMD-PNQAPYTVCNSSLSEYGVLGFELGFAMASPNALVLWEAQFGDFHNTAQCIIDQFI 763

  Fly   682 VSGETKWMESNALVMLLPHGYDGAASEHSSCRIERFLQLCDSKETSADGD--------------- 731
            ..|:.||:..|.:|:|||||.:|...||||.|.|||||:|:.     |.|               
Zfish   764 CPGQAKWVRQNGIVLLLPHGMEGMGPEHSSARPERFLQMCND-----DPDVFPKITEDFAVRQLY 823

  Fly   732 SVNVHIVNPTTPAQYYHVLRRQLARNFRKPLVVVAPKTLLRLPAATSTHEDFQPGTLFHNVLGDT 796
            ..|..:||.:|||.|:||||||:...|||||::..||:|||.|.|.|:.|:..|||.|..::   
Zfish   824 DCNWIVVNCSTPANYFHVLRRQILLPFRKPLIIFTPKSLLRHPEAKSSFEEMLPGTHFSRLI--- 885

  Fly   797 IAKPEQ---------VRKVILCSGKHYYTLAEEREKRQAYD-TAILRLESLCPFPIQELQAQLAQ 851
               |||         |:.:|.|:||.:|.|..||:.|...: .||.|:|.|.|||...::|:..:
Zfish   886 ---PEQGSASQSAAGVQHLIFCTGKVFYDLQRERKSRGLEERVAISRIEQLSPFPFDLVKAEAEK 947

  Fly   852 YGNVQSFVWSQEEHRNMGAWTFVRPRFENLIG--QQLHYCGRCEAPTPATGIGKVHKREVDEIVA 914
            |.:.. .:|.||||:|.|.:.:|:||....:.  :.:.|.||..|..||||..|.|..|:...:.
Zfish   948 YPHAH-LLWCQEEHKNQGYYDYVKPRISTTLNNTRPVWYVGRDPAAAPATGNKKAHLLELQRFLD 1011

  Fly   915 APFEL 919
            ..|.|
Zfish  1012 TAFNL 1016

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1544NP_651849.1 sucA 35..918 CDD:236499 329/946 (35%)
TPP_E1_OGDC_like 178..449 CDD:238974 104/278 (37%)
Transket_pyr 569..772 CDD:280874 105/218 (48%)
OxoGdeHyase_C 779..917 CDD:293475 49/149 (33%)
ogdhbXP_001338181.2 2-oxogl_dehyd_N 51..86 CDD:292696
sucA 53..1015 CDD:236499 335/977 (34%)
TPP_E1_OGDC_like 265..528 CDD:238974 104/278 (37%)
Transket_pyr 650..864 CDD:280874 105/220 (48%)
OxoGdeHyase_C 871..1014 CDD:293475 49/149 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D134699at2759
OrthoFinder 1 1.000 - - FOG0000624
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100311
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.820

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