DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1544 and ogdha

DIOPT Version :9

Sequence 1:NP_651849.1 Gene:CG1544 / 43689 FlyBaseID:FBgn0039827 Length:919 Species:Drosophila melanogaster
Sequence 2:XP_005172525.1 Gene:ogdha / 564552 ZFINID:ZDB-GENE-030131-2143 Length:1054 Species:Danio rerio


Alignment Length:998 Identity:339/998 - (33%)
Similarity:528/998 - (52%) Gaps:133/998 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LALSEAGIAKLPRPQSRCYHSEKGVWGYKPIAQREFQVAEDVRASRNSQANVYRFVEAFRQHGHK 69
            |.:|.||:|:           .:.:.|.:|..::   :.||..|       |...:.|::..||.
Zfish   100 LGVSLAGLAQ-----------AQSLVGAQPNVEK---LVEDHLA-------VQSLIRAYQIRGHH 143

  Fly    70 LAAVNPISIR-------------TSQQEL------QELS---------------------PAFYG 94
            :|.::|:.|.             ||..:|      :.||                     ..|||
Zfish   144 VAQLDPLGIMDADLDSCVPTDIITSSDKLDLTHVKKRLSALTIGESEFHFAENSQICNWEKGFYG 208

  Fly    95 LQTQE-------PVRTDGLLSGPQVAHNVAQLEQLLKDIYCGRSTSAEFSYVEDIEEREWLARNF 152
            |:..:       |..|  .:.|.:.|..:.::.:.|:..|| :....||.::.|:::.:|:.:.|
Zfish   209 LEESDLDKVFRLPTTT--FIGGDESALPLREIIRRLEMAYC-QHIGVEFMFINDLDQCQWIRQKF 270

  Fly   153 ETLDQQQLGKSERCEIAELLIKSQAWDNFMALKFPTVKRYGGEGAESMLAFFWQLLRDSVQANIE 217
            |.....|....|:..:...:::|..::.|:..|:.:.||:|.||.||::.....::..|.:..::
Zfish   271 ERPGVMQFSLEEKRTLLARMVRSTRFEEFLQRKWSSEKRFGLEGCESLIPALKTIIDKSSENGVD 335

  Fly   218 HVVLAMPHRGRTPLQAALLNMRPAKVF----RKLSGASEFSEDIEAMSDVISHFHVS----EQLK 274
            .|::.||||||..:.|.::.....::|    .||..|.|.|.|::        :|:.    ...:
Zfish   336 TVIMGMPHRGRLNVLANVIRKELEQIFCQFDSKLEAADEGSGDVK--------YHLGMYHRRINR 392

  Fly   275 ILGKKLSFSMVRNPSHLEAANPVAMGKTRSKQQARGEGAFGDGSQPFGEHVLNVILHGDAAFAGQ 339
            :..:.::.|:|.|||||||.|||..|||:::|...|:        ..|:.|::::||||||||||
Zfish   393 VTNRNITLSLVANPSHLEAVNPVVQGKTKAEQFYSGD--------TDGKRVMSILLHGDAAFAGQ 449

  Fly   340 GINQECLNMAYVPHFEVGGSLHLIVNNQVGFTTPGDRGRSTAYTSDLAKSIQAPVFHVNGDDPEA 404
            ||..|..:::.:|.:...|::|::.|||:||||.....||:.|.:|:|:.:.||:||||.|||||
Zfish   450 GIVYETFHLSDLPSYTTHGTVHVVANNQIGFTTDPRMARSSPYPTDVARVVNAPIFHVNADDPEA 514

  Fly   405 LARVTSLAFRYQREFRKDIFIDLNCFRRWGHNELDDPTFTNPLVYKIVHQRESVPDLYAQQLAKE 469
            :..|.::|..::..|.||:.:||.|:||.||||:|:|.||.||:||.:.:::.|...||::|..|
Zfish   515 VMYVCNVAAEWRATFHKDVVVDLVCYRRNGHNEMDEPMFTQPLMYKQIKKQKGVLQKYAEKLIAE 579

  Fly   470 QVLSESKAKEMRDEYMKYLGE-------ELALAPAY---QPPPSYFEKQWTNFQLAPSKELTYWD 524
            ..::..:.:|...:|.|...|       |..|...:   .|.|.:|...      ...|.::...
Zfish   580 GAVTRQEYEEEIAKYDKICEEAHSRSKDEKILHIKHWLDSPWPGFFTLD------GQPKSISCPS 638

  Fly   525 TGLDYSLLHYIGQQSVTFP-EDFNIHPHLLKTHVNARLKKLENGVKIDWSTAEALAIGSLMYQGH 588
            |||....|..|||.:.:.| |||.||..|.:. :..|...::|.. :||:..|.:|.|||:.:|.
Zfish   639 TGLPEEELAQIGQVASSVPVEDFTIHGGLSRI-LKGRGDMIKNRT-VDWALGEYMAFGSLLKEGI 701

  Fly   589 NVRISGEDVGRGTFSHRHAMLVDQQTNE-MFIPLNSMEGGNGGKLELAHSILSEEAVLGFEYGMA 652
            :||:||:||.||||||||.:|.||..:: :.||:|.| ..|.....:.:|.|||..|||||.|.|
Zfish   702 HVRLSGQDVERGTFSHRHHVLHDQNVDKRICIPMNHM-SPNQAPYTVCNSSLSEYGVLGFELGFA 765

  Fly   653 IDNPNNLIIWEAQFGDFANGAQIIIDTFIVSGETKWMESNALVMLLPHGYDGAASEHSSCRIERF 717
            :.:||.|::||||||||.|.||.|||.||..|:.||:..|.:|:|||||.:|...||||.|.|||
Zfish   766 MASPNALVLWEAQFGDFHNTAQCIIDQFICPGQAKWVRQNGIVLLLPHGMEGMGPEHSSARPERF 830

  Fly   718 LQLCD-----SKETSADGD-----SVNVHIVNPTTPAQYYHVLRRQLARNFRKPLVVVAPKTLLR 772
            ||:|:     :.:.:.|.|     ..|..:||.:.||.|:||:|||:...|||||:|..||:|||
Zfish   831 LQMCNDDPDFNPKITDDFDVRQLYDCNWIVVNCSNPANYFHVIRRQILLPFRKPLIVFTPKSLLR 895

  Fly   773 LPAATSTHEDFQPGTLFHNVL---GDTIAKPEQVRKVILCSGKHYYTLAEEREKRQAYDT-AILR 833
            .|.|.|..:...|||.|..|:   |.....|.:|::::.|:||.||.|..||:.|...:: ||.|
Zfish   896 HPEAKSNFDQMLPGTHFQRVITDDGPPAQNPSEVKRIVFCTGKIYYELTRERKARNMENSVAITR 960

  Fly   834 LESLCPFPIQELQAQLAQYGNVQSFVWSQEEHRNMGAWTFVRPRFENLIG--QQLHYCGRCEAPT 896
            :|.|.|||...::|:..::.|. ..||.||||:|.|.:.:|:||....|.  :.:.|.||..|..
Zfish   961 IEQLSPFPFDLVRAETEKFPNA-DLVWCQEEHKNQGYYDYVKPRMRTTINRTKPVWYAGREPAAA 1024

  Fly   897 PATGIGKVHKREVDEIVAAPFEL 919
            ||||....|..|:...:...|.|
Zfish  1025 PATGNKNTHLLELKRFLDTAFNL 1047

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1544NP_651849.1 sucA 35..918 CDD:236499 330/965 (34%)
TPP_E1_OGDC_like 178..449 CDD:238974 104/278 (37%)
Transket_pyr 569..772 CDD:280874 104/213 (49%)
OxoGdeHyase_C 779..917 CDD:293475 49/143 (34%)
ogdhaXP_005172525.1 2-oxogl_dehyd_N 48..83 CDD:292696
sucA 50..1046 CDD:236499 337/995 (34%)
TPP_E1_OGDC_like 296..559 CDD:238974 104/278 (37%)
Transket_pyr 681..895 CDD:280874 104/215 (48%)
OxoGdeHyase_C 902..1045 CDD:293475 49/143 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0567
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D134699at2759
OrthoFinder 1 1.000 - - FOG0000624
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100311
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.720

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