DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1544 and Ogdh

DIOPT Version :9

Sequence 1:NP_651849.1 Gene:CG1544 / 43689 FlyBaseID:FBgn0039827 Length:919 Species:Drosophila melanogaster
Sequence 2:XP_038948146.1 Gene:Ogdh / 360975 RGDID:1561359 Length:1038 Species:Rattus norvegicus


Alignment Length:997 Identity:339/997 - (34%)
Similarity:528/997 - (52%) Gaps:144/997 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LALSEAGIAKLPRPQSRCYHSEKGVWGYKPIAQREFQVAEDVRASRNSQANVYRFVE-------- 61
            |:||.:.:|.:...||..                            .:|.||.:.||        
  Rat    97 LSLSRSSLATMAHAQSLV----------------------------EAQPNVDKLVEDHLAVQSL 133

  Fly    62 --AFRQHGHKLAAVNPISIRTSQQELQELSPA-------------------------FYGLQTQE 99
              |::..||.:|.::|:.|..:  :|....||                         ||||...:
  Rat   134 IRAYQIRGHHVAQLDPLGILDA--DLDSSVPADIISSTDKLDLAVFKERLRMLTVGGFYGLHESD 196

  Fly   100 -------PVRTDGLLSGPQVAHNVAQLEQLLKDIYCGRSTSAEFSYVEDIEEREWLARNFETLDQ 157
                   |..|  .:.|.:.|..:.::.:.|:..|| :....||.::.|:|:.:|:.:.|||...
  Rat   197 LDKVFHLPTTT--FIGGQEPALPLREIIRRLEMAYC-QHIGVEFMFINDLEQCQWIRQKFETPGI 258

  Fly   158 QQLGKSERCEIAELLIKSQAWDNFMALKFPTVKRYGGEGAESMLAFFWQLLRDSVQANIEHVVLA 222
            .|....|:..:...|::|..::.|:..|:.:.||:|.||.|.::.....::..|....:::|::.
  Rat   259 MQFTNEEKRTLLARLVRSTRFEEFLQRKWSSEKRFGLEGCEVLIPALKTIIDMSSANGVDYVIMG 323

  Fly   223 MPHRGRTPLQAALLNMRPAKVF----RKLSGASEFSEDIEAMSDVISHFHVS----EQLKILGKK 279
            ||||||..:.|.::.....::|    .||..|.|.|.|::        :|:.    ...::..:.
  Rat   324 MPHRGRLNVLANVIRKELEQIFCQFDSKLEAADEGSGDMK--------YHLGMYHRRINRVTDRN 380

  Fly   280 LSFSMVRNPSHLEAANPVAMGKTRSKQQARGEGAFGDGSQPFGEHVLNVILHGDAAFAGQGINQE 344
            ::.|:|.||||||||:||.||||:::|...|:..        |:.|::::||||||||||||..|
  Rat   381 ITLSLVANPSHLEAADPVVMGKTKAEQFYCGDTE--------GKKVMSILLHGDAAFAGQGIVYE 437

  Fly   345 CLNMAYVPHFEVGGSLHLIVNNQVGFTTPGDRGRSTAYTSDLAKSIQAPVFHVNGDDPEALARVT 409
            ..:::.:|.:...|::|::||||:||||.....||:.|.:|:|:.:.||:||||.|||||:..|.
  Rat   438 TFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSSPYPTDVARVVNAPIFHVNSDDPEAVMYVC 502

  Fly   410 SLAFRYQREFRKDIFIDLNCFRRWGHNELDDPTFTNPLVYKIVHQRESVPDLYAQQLAKEQVLSE 474
            .:|..::..|.||:.:||.|:||.||||:|:|.||.||:||.:.:::.|...||:.|..:.|:::
  Rat   503 KVAAEWRNTFHKDVVVDLVCYRRNGHNEMDEPMFTQPLMYKQIRKQKPVLQKYAELLVSQGVVNQ 567

  Fly   475 SKAKEMRDEYMKYLGEELALAPAYQ----------PPPSYFEKQWTNFQLAPSKELTYWDTGLDY 529
            .:.:|...:|.|...|....:...:          |.|.:|...      ...:.:|...|||:.
  Rat   568 PEYEEEISKYDKICEEAFTRSKDEKILHIKHWLDSPWPGFFTLD------GQPRSMTCPSTGLEE 626

  Fly   530 SLLHYIGQQSVTFP-EDFNIH---PHLLKTHVNARLKKLENGVKIDWSTAEALAIGSLMYQGHNV 590
            .:|.:||..:.:.| |:|.||   ..:|||.     ::|.....:||:.||.:|.|||:.:|.:|
  Rat   627 DILTHIGNVASSVPVENFTIHGGLSRILKTR-----RELVTNRTVDWALAEYMAFGSLLKEGIHV 686

  Fly   591 RISGEDVGRGTFSHRHAMLVDQQTNE-MFIPLNSMEGGNGGKLELAHSILSEEAVLGFEYGMAID 654
            |:||:||.||||||||.:|.||..:: ..||:|.: ..|.....:.:|.|||..|||||.|.|:.
  Rat   687 RLSGQDVERGTFSHRHHVLHDQNVDKRTCIPMNHL-WPNQAPYTVCNSSLSEYGVLGFELGFAMA 750

  Fly   655 NPNNLIIWEAQFGDFANGAQIIIDTFIVSGETKWMESNALVMLLPHGYDGAASEHSSCRIERFLQ 719
            :||.|::||||||||.|.||.|||.||..|:.||:..|.:|:|||||.:|...||||.|.|||||
  Rat   751 SPNALVLWEAQFGDFNNMAQCIIDQFICPGQAKWVRQNGIVLLLPHGMEGMGPEHSSARPERFLQ 815

  Fly   720 LCDS--------KETSADGDSV---NVHIVNPTTPAQYYHVLRRQLARNFRKPLVVVAPKTLLRL 773
            :|:.        :|.:.|...:   |..:||.:||..::||||||:...|||||:|..||:|||.
  Rat   816 MCNDDPDVLPNLQEENFDISQLYDCNWIVVNCSTPGNFFHVLRRQILLPFRKPLIVFTPKSLLRH 880

  Fly   774 PAATSTHEDFQPGTLFHNVL---GDTIAKPEQVRKVILCSGKHYYTLAEEREKR-QAYDTAILRL 834
            |.|.::.::..|||.|..|:   |.....|::|::::.|:||.||.|..||:.| .|.:.||.|:
  Rat   881 PEARTSFDEMLPGTHFQRVIPEDGPAAQNPDKVKRLLFCTGKVYYDLTRERKARDMAEEVAITRI 945

  Fly   835 ESLCPFPIQELQAQLAQYGNVQSFVWSQEEHRNMGAWTFVRPRFENLI--GQQLHYCGRCEAPTP 897
            |.|.|||...|..:..:|.|.: ..|.||||:|.|.:.:|:||....|  .:.:.|.||..|..|
  Rat   946 EQLSPFPFDLLLKEAQKYPNAE-LAWCQEEHKNQGYYDYVKPRLRTTIDRAKPVWYAGRDPAAAP 1009

  Fly   898 ATGIGKVHKREVDEIVAAPFEL 919
            |||..|.|..|:...:...|:|
  Rat  1010 ATGNKKTHLTELQRFLDTAFDL 1031

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1544NP_651849.1 sucA 35..918 CDD:236499 331/964 (34%)
TPP_E1_OGDC_like 178..449 CDD:238974 105/278 (38%)
Transket_pyr 569..772 CDD:280874 104/214 (49%)
OxoGdeHyase_C 779..917 CDD:293475 51/143 (36%)
OgdhXP_038948146.1 sucA 49..1030 CDD:236499 337/994 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0567
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D134699at2759
OrthoFinder 1 1.000 - - FOG0000624
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100311
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.720

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