DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1544 and SPBC3H7.03c

DIOPT Version :9

Sequence 1:NP_651849.1 Gene:CG1544 / 43689 FlyBaseID:FBgn0039827 Length:919 Species:Drosophila melanogaster
Sequence 2:NP_595772.1 Gene:SPBC3H7.03c / 2540991 PomBaseID:SPBC3H7.03c Length:1009 Species:Schizosaccharomyces pombe


Alignment Length:892 Identity:331/892 - (37%)
Similarity:507/892 - (56%) Gaps:49/892 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 VYRFVEAFRQHGHKLAAVNPISIRTSQQELQELSPAFYGLQTQEPVRTDGLLSGPQVAHN----- 115
            |...|.|::..||.||.::|:.|..:.....||:...||....:..||..|  ||.:..|     
pombe   128 VQLLVRAYQSRGHHLAKLDPLGINVNHNRPSELTLEHYGFTESDLNRTIHL--GPGILPNFREAG 190

  Fly   116 -----VAQLEQLLKDIYCGRSTSAEFSYVEDIEEREWLARNFETLDQQQLGKSERCEIAELLIKS 175
                 :.::.:..:.|||| |.:.||:::...:...|:..:.||....:....::..|.:.|..:
pombe   191 RKTMTLREIVETCEKIYCG-SFAVEFTHISSRKRSNWILSHLETPTPFRYSHDQKIMIFDRLSWA 254

  Fly   176 QAWDNFMALKFPTVKRYGGEGAESMLAFFWQLLRDSVQANIEHVVLAMPHRGRTPLQAALLNMRP 240
            .:::.|:..|||..||:|.||.|:|:.....|:..||...|.::|:.|.||||..|...::....
pombe   255 DSFERFLFTKFPNDKRFGLEGCEAMVPGMKALIDRSVDEGISNIVIGMAHRGRLNLLHNIVRKPA 319

  Fly   241 AKVFRKLSGASEFSEDIEAMSDVISHFHVSEQLKI-LGKKLSFSMVRNPSHLEAANPVAMGKTRS 304
            ..:|.:..|..:  .|.|...||..|..::.|... .||::|.|:|.|||||||.:||.:||.|:
pombe   320 QAIFSEFRGTQD--PDDEGSGDVKYHLGMNYQRPTPSGKRVSLSLVANPSHLEAEDPVVLGKVRA 382

  Fly   305 KQQARGEGAFGDGSQPFGEHVLNVILHGDAAFAGQGINQECLNMAYVPHFEVGGSLHLIVNNQVG 369
            .|....:.|..:.|       :.:::|||||||.||:..|...:..:|.:..||::|:::|||:|
pombe   383 IQHYTSDEASHEQS-------MGILIHGDAAFAAQGVVYETFGLHALPGYSTGGTVHIVINNQIG 440

  Fly   370 FTTPGDRGRSTAYTSDLAKSIQAPVFHVNGDDPEALARVTSLAFRYQREFRKDIFIDLNCFRRWG 434
            |||.....|||.|.:|:|||::||:|||||||.||:..:..||..:::.|:.|:.:|:.|:||.|
pombe   441 FTTDPRFARSTPYCTDIAKSMEAPIFHVNGDDVEAVTFICQLAADWRKAFKTDVVVDIVCYRRHG 505

  Fly   435 HNELDDPTFTNPLVYKIVHQRESVPDLYAQQLAKEQVLSESKAKEMRDEYMKYLGEELALAPAYQ 499
            |||.|.|:||.|.:||.:.:......:|.|||.:|:.:|:::...........|......:..|:
pombe   506 HNETDQPSFTQPRMYKAIAKHPPTFKIYTQQLLQEKTVSKAEVDAQEKRVWDILESSFESSKNYK 570

  Fly   500 PP-PSYFEKQWTNFQLAP----SKELTYWDTGLDYSLLHYIGQQSVTFPEDFNIHPHLLKTHVNA 559
            .. ..:....|..| .:|    :|.|..:.||::...|..||:...|.||.|:.|.: ||..:|.
pombe   571 SDHREWLSNPWVGF-ASPKDLMTKILPSYPTGVNIDTLKQIGKALYTLPEGFDAHRN-LKRILNN 633

  Fly   560 RLKKLENGVKIDWSTAEALAIGSLMYQGHNVRISGEDVGRGTFSHRHAMLVDQQTNEMFIPLNSM 624
            |.|.:.:|..||..||||||.|:|:.:||:||:||:||.|||||.|||:|.||.:..::||||.:
pombe   634 RNKSISSGEGIDMPTAEALAFGTLLEEGHHVRVSGQDVERGTFSQRHAVLHDQSSENVYIPLNHL 698

  Fly   625 EGGNGGKLELAHSILSEEAVLGFEYGMAIDNPNNLIIWEAQFGDFANGAQIIIDTFIVSGETKWM 689
             ..|.....:.:|.|||..|||||||.::.:||.|::||||||||||.||.|||.||.:|||||:
pombe   699 -SPNQASFVIRNSSLSEYGVLGFEYGYSLSSPNALVVWEAQFGDFANNAQCIIDQFIAAGETKWL 762

  Fly   690 ESNALVMLLPHGYDGAASEHSSCRIERFLQLC--DSKETSAD------GDSVNVHIVNPTTPAQY 746
            :...:|:.|||||||...||||.|:||:||||  |.:|..::      ....|:..:..|.|:||
pombe   763 QRTGIVLSLPHGYDGQGPEHSSARMERYLQLCNEDPREFPSEEKLQRQHQDCNIQAIYVTKPSQY 827

  Fly   747 YHVLRRQLARNFRKPLVVVAPKTLLRLPAATSTHEDFQPGTLFHNVL-----GDTIAKPEQVRKV 806
            :|.|||.:.|.||||||:...|:|||.|||.||.::|.....|..:|     |.:|..||::.|:
pombe   828 FHALRRNIHRQFRKPLVIFFSKSLLRHPAARSTIDEFDEKHGFKLILEEEEHGKSILPPEKIEKL 892

  Fly   807 ILCSGKHYYTLAEEREKRQAYDTAILRLESLCPFPIQELQAQLAQYGNVQSFVWSQEEHRNMGAW 871
            |:|||:.:..|::.||:.:..:.||.|:|.|.||..:::.|.::||.|::..:|.|||..|.|||
pombe   893 IICSGQVWVALSKAREENKIDNIAITRVEQLHPFGWKQMAANISQYPNLKEIIWCQEEPLNAGAW 957

  Fly   872 TFVRPRFENL---IGQQL--HYCGRCEAPTPATGIGKVHKREVDEIV 913
            |::.||...:   :|:.|  .|.||..:.:.|.|..:.|..|.::.:
pombe   958 TYMEPRIYTILKHLGRDLPVRYAGRPPSASVAAGNKQQHLAEQEQFL 1004

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1544NP_651849.1 sucA 35..918 CDD:236499 331/892 (37%)
TPP_E1_OGDC_like 178..449 CDD:238974 107/271 (39%)
Transket_pyr 569..772 CDD:280874 109/210 (52%)
OxoGdeHyase_C 779..917 CDD:293475 47/145 (32%)
SPBC3H7.03cNP_595772.1 SucA 39..1008 CDD:223641 331/892 (37%)
2-oxogl_dehyd_N 45..82 CDD:292696
TPP_E1_OGDC_like 257..520 CDD:238974 107/271 (39%)
Transket_pyr 642..853 CDD:280874 109/211 (52%)
OxoGdeHyase_C 860..1008 CDD:293475 47/145 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 86 1.000 Domainoid score I2173
eggNOG 1 0.900 - - E1_COG0567
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000624
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100311
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.710

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