DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1544 and Ogdhl

DIOPT Version :9

Sequence 1:NP_651849.1 Gene:CG1544 / 43689 FlyBaseID:FBgn0039827 Length:919 Species:Drosophila melanogaster
Sequence 2:NP_001074599.2 Gene:Ogdhl / 239017 MGIID:3616088 Length:1010 Species:Mus musculus


Alignment Length:957 Identity:342/957 - (35%)
Similarity:523/957 - (54%) Gaps:126/957 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 VAEDVRASRNSQANVYRFVE----------AFRQHGHKLAAVNPISIRTSQQELQELSP------ 90
            |.::.|.|.:|.....:.||          |::..||.:|.::|:.|..:  :|....|      
Mouse    93 VLQESRTSVSSCTKTSKLVEDHLAVQSLIRAYQIRGHHVAQLDPLGILDA--DLDSFVPSDLITT 155

  Fly    91 ----AFYGLQTQE-------PVRTDGLLSGPQVAHNVAQLEQLLKDIYCGRSTSAEFSYVEDIEE 144
                |||.||..:       |..|  .:.||:...::.::.:.|:..|| :....||.::.|:|:
Mouse   156 IDKLAFYDLQEADLDKEFRLPTTT--FIGGPENTLSLREIIRRLESTYC-QHIGLEFMFINDVEQ 217

  Fly   145 REWLARNFETLDQQQLGKSERCEIAELLIKSQAWDNFMALKFPTVKRYGGEGAESMLAFFWQLLR 209
            .:|:.:.|||....|....|:..:...|::|..:::|:|.|:.:.||:|.||.|.|:.....::.
Mouse   218 CQWIRQKFETPGVMQFSVEEKRTLLARLVRSMRFEDFLARKWSSEKRFGLEGCEVMIPALKTIID 282

  Fly   210 DSVQANIEHVVLAMPHRGRTPLQAALLNMRPAKVF----RKLSGASEFSEDIEAMSDVISHFHVS 270
            .|.:..||:|:|.||||||..:.|.::.....::|    .||..|.|.|.|::        :|:.
Mouse   283 KSSEMGIENVILGMPHRGRLNVLANVIRKDLEQIFCQFDPKLEAADEGSGDVK--------YHLG 339

  Fly   271 ---EQL-KILGKKLSFSMVRNPSHLEAANPVAMGKTRSKQQARGEGAFGDGSQPFGEHVLNVILH 331
               |:: ::..:.::.|:|.|||||||.:||..|||:::|..||:..        |..|:::::|
Mouse   340 MYHERINRVTNRNITLSLVANPSHLEAVDPVVQGKTKAEQFYRGDAQ--------GRKVMSILVH 396

  Fly   332 GDAAFAGQGINQECLNMAYVPHFEVGGSLHLIVNNQVGFTTPGDRGRSTAYTSDLAKSIQAPVFH 396
            |||||||||:..|..:::.:|.:...|::|::||||:||||.....||:.|.:|:|:.:.||:||
Mouse   397 GDAAFAGQGVVYETFHLSDLPSYTTNGTVHVVVNNQIGFTTDPRMARSSPYPTDVARVVNAPIFH 461

  Fly   397 VNGDDPEALARVTSLAFRYQREFRKDIFIDLNCFRRWGHNELDDPTFTNPLVYKIVHQRESVPDL 461
            ||.|||||:..|.|:|..::..|.||:.:||.|:||.||||:|:|.||.||:||.:|::..|...
Mouse   462 VNADDPEAVIYVCSVAAEWRNTFNKDVVVDLVCYRRRGHNEMDEPMFTQPLMYKQIHKQVPVLKK 526

  Fly   462 YAQQLAKEQVLSESKAKEMRDEYMKY--LGEELALAPAY----------------QPPPSYFEKQ 508
            ||.:|..|..::   .:|..:|..||  :.||     ||                .|.|.:|   
Mouse   527 YADKLIAEGTVT---LQEFEEEIAKYDRICEE-----AYGRSKDKKILHIKHWLDSPWPGFF--- 580

  Fly   509 WTNFQLAPSKELTYWDTGLDYSLLHYIGQQSVTFP-EDFNIH---PHLLKTHVNARLKKLENGVK 569
              |....| |.:|...||:...:|.:||..:.:.| |||.||   ..:|:...:...|:     .
Mouse   581 --NVDGEP-KSMTCPTTGIPEEMLTHIGSVASSVPLEDFKIHTGLSRILRGRADMTKKR-----T 637

  Fly   570 IDWSTAEALAIGSLMYQGHNVRISGEDVGRGTFSHRHAMLVDQQTN-EMFIPLNSMEGGNGGKLE 633
            :||:.||.:|.|||:.:|.:||:||:||.||||||||.:|.||:.: ...:|:|.: ..:.....
Mouse   638 VDWALAEYMAFGSLLKEGIHVRLSGQDVERGTFSHRHHVLHDQEVDRRTCVPMNHL-WPDQAPYT 701

  Fly   634 LAHSILSEEAVLGFEYGMAIDNPNNLIIWEAQFGDFANGAQIIIDTFIVSGETKWMESNALVMLL 698
            :.:|.|||..|||||.|.|:.:||.|::||||||||.|.||.|||.||.:|:.||:..|.:|:||
Mouse   702 VCNSSLSEYGVLGFELGYAMASPNALVLWEAQFGDFHNTAQCIIDQFISTGQAKWVRHNGIVLLL 766

  Fly   699 PHGYDGAASEHSSCRIERFLQLCDSKETSADGDSVNVH---------------IVNPTTPAQYYH 748
            |||.:|...||||.|.|||||:     ::.|.|:..|.               :||.:|||.|:|
Mouse   767 PHGMEGMGPEHSSARPERFLQM-----SNDDSDAYPVFTEDFEVSQLYDCNWIVVNCSTPASYFH 826

  Fly   749 VLRRQLARNFRKPLVVVAPKTLLRLPAATSTHEDFQPGTLFHNVL---GDTIAKPEQVRKVILCS 810
            |||||:...|||||:|..||:|||.|.|.|:.:....||.|..::   |.....||||:::|.|:
Mouse   827 VLRRQILLPFRKPLIVFTPKSLLRHPDAKSSFDQMVSGTSFQRLIPEDGPAAHSPEQVQRLIFCT 891

  Fly   811 GKHYYTLAEEREKR-QAYDTAILRLESLCPFPIQELQAQLAQYGNVQSFVWSQEEHRNMGAWTFV 874
            ||.||.|.:||..: .....||.|||.:.|||...:..:..:|...: .||.||||:|||.:.::
Mouse   892 GKVYYDLVKERSSQGLEQQVAITRLEQISPFPFDLIMREAEKYSGAE-LVWCQEEHKNMGYYDYI 955

  Fly   875 RPRFENLIG--QQLHYCGRCEAPTPATGIGKVHKREVDEIVAAPFEL 919
            .|||..|:|  :.:.|.||..|..||||....|...:...:...|.|
Mouse   956 SPRFMTLLGHSRPIWYVGRDPAAAPATGNKNAHLVSLRRFLDTAFNL 1002

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1544NP_651849.1 sucA 35..918 CDD:236499 340/954 (36%)
TPP_E1_OGDC_like 178..449 CDD:238974 109/278 (39%)
Transket_pyr 569..772 CDD:280874 103/218 (47%)
OxoGdeHyase_C 779..917 CDD:293475 49/143 (34%)
OgdhlNP_001074599.2 sucA 45..1001 CDD:236499 340/954 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D134699at2759
OrthoFinder 1 1.000 - - FOG0000624
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100311
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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