DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1544 and ogdh

DIOPT Version :9

Sequence 1:NP_651849.1 Gene:CG1544 / 43689 FlyBaseID:FBgn0039827 Length:919 Species:Drosophila melanogaster
Sequence 2:XP_012814170.1 Gene:ogdh / 100216252 XenbaseID:XB-GENE-1010761 Length:1021 Species:Xenopus tropicalis


Alignment Length:936 Identity:332/936 - (35%)
Similarity:523/936 - (55%) Gaps:104/936 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 SQANVYRFVE----------AFRQHGHKLAAVNPISIRTSQQELQELSPA----------FYGLQ 96
            :|.|:.:.||          |::..||.:|.::|:.|..:  :|....||          |||||
 Frog   115 AQPNIDKLVEDHLAVQSLIRAYQIRGHHVAQLDPLGILDA--DLDSCVPADIVTSSDKLGFYGLQ 177

  Fly    97 TQE-------PVRTDGLLSGPQVAHNVAQLEQLLKDIYCGRSTSAEFSYVEDIEEREWLARNFET 154
            ..:       |..|  .:.|.::|..:.::.:.|:..|| :....||.::.|:|:.:|:.:.|||
 Frog   178 ESDLDKVFHLPTTT--FIGGNEMALPLREIIRRLETAYC-QHIGVEFMFINDLEQCQWIRQKFET 239

  Fly   155 LDQQQLGKSERCEIAELLIKSQAWDNFMALKFPTVKRYGGEGAESMLAFFWQLLRDSVQANIEHV 219
            ....|....|:..:...|::|..::.|:..|:.:.||:|.||.|.::.....::..|.:..:::|
 Frog   240 PGIMQFNNEEKRTLLARLVRSTRFEEFLHRKWSSEKRFGLEGCEGLIPALKTIIDKSSENGVDYV 304

  Fly   220 VLAMPHRGRTPLQAALLNMRPAKVF----RKLSGASEFSEDIEAMSDVISHFHVS----EQLKIL 276
            ::.||||||..:.|.::.....::|    .||..|.|.|.|::        :|:.    ...::.
 Frog   305 IMGMPHRGRLNVLANVIRKELEQIFCQFDSKLEAADEGSGDVK--------YHLGMYHRRINRVT 361

  Fly   277 GKKLSFSMVRNPSHLEAANPVAMGKTRSKQQARGEGAFGDGSQPFGEHVLNVILHGDAAFAGQGI 341
            .:.::.|:|.||||||||:||..|||:::|...|:..        |:.|::::||||||||||||
 Frog   362 DRNITLSLVANPSHLEAADPVVQGKTKAEQFYCGDTE--------GKKVMSILLHGDAAFAGQGI 418

  Fly   342 NQECLNMAYVPHFEVGGSLHLIVNNQVGFTTPGDRGRSTAYTSDLAKSIQAPVFHVNGDDPEALA 406
            ..|..:::.:|.:...|::|::||||:||||.....||:.|.:|:|:.:.||:||||.|||||:.
 Frog   419 VYETFHLSDLPSYTTHGTVHVVVNNQIGFTTDPRMARSSPYPTDVARVVNAPIFHVNADDPEAVM 483

  Fly   407 RVTSLAFRYQREFRKDIFIDLNCFRRWGHNELDDPTFTNPLVYKIVHQRESVPDLYAQQLAKEQV 471
            .|.::|..::..|.||:.:||.|:||.||||:|:|.||.||:||.:.::::|...||:.|..:.|
 Frog   484 YVCNVAAEWRSTFHKDVVVDLVCYRRNGHNEMDEPMFTQPLMYKQIRKQKTVLQKYAETLISQGV 548

  Fly   472 LSESKAKEMRDEYMKYLGEELALAPAYQ----------PPPSYFEKQWTNFQLAPSKELTYWDTG 526
            :::.:.:|...:|.|...|..|.:...:          |.|.:|...      ...:.::...||
 Frog   549 VNQPEYEEEISKYDKICEEAFARSKDEKILHIKHWLDSPWPGFFTLD------GQPRSMSCPSTG 607

  Fly   527 LDYSLLHYIGQQSVTFP-EDFNIHPHLLKTHVNARLKKLENGVKIDWSTAEALAIGSLMYQGHNV 590
            |...:|.:||..:.:.| |||.||..|.:. :..|.:.::|. .:||:.||.:|:|||:.:|.::
 Frog   608 LSEEVLTHIGTVASSVPVEDFTIHGGLSRI-LKGRGEMVKNR-SVDWALAEYMALGSLLKEGIHI 670

  Fly   591 RISGEDVGRGTFSHRHAMLVDQQTNE-MFIPLNSMEGGNGGKLELAHSILSEEAVLGFEYGMAID 654
            |:||:||.||||||||.:|.||..:: ..||:|.: ..|.....:.:|.|||..|||||.|.|:.
 Frog   671 RLSGQDVERGTFSHRHHVLHDQNVDKRTCIPMNHL-WPNQAPYTVCNSSLSEYGVLGFELGFAMA 734

  Fly   655 NPNNLIIWEAQFGDFANGAQIIIDTFIVSGETKWMESNALVMLLPHGYDGAASEHSSCRIERFLQ 719
            :||.|::||||||||.|.||.|||.|:..|:.||:..|.:|:|||||.:|...||||.|.|||||
 Frog   735 SPNALVLWEAQFGDFHNTAQCIIDQFVCPGQAKWVRQNGIVLLLPHGMEGMGPEHSSARPERFLQ 799

  Fly   720 LCDSKETSADGD---------------SVNVHIVNPTTPAQYYHVLRRQLARNFRKPLVVVAPKT 769
            :|:.     |.|               ..|..:||.:|||.::||:|||:...|||||:|..||:
 Frog   800 MCND-----DPDVWPKVSEDIAVRQLYDCNWIVVNCSTPASFFHVIRRQILLPFRKPLIVFTPKS 859

  Fly   770 LLRLPAATSTHEDFQPGTLFHNVL---GDTIAKPEQVRKVILCSGKHYYTLAEEREKR-QAYDTA 830
            |||.|.|.|:.::..|||.|..::   |.....||||:::|.|:||.||.|.:||..| ...|.|
 Frog   860 LLRHPEARSSFDEMLPGTHFERIIPDAGPASQNPEQVKRLIFCTGKVYYELNKERSSRGMDGDVA 924

  Fly   831 ILRLESLCPFPIQELQAQLAQYGNVQSFVWSQEEHRNMGAWTFVRPRFENLI--GQQLHYCGRCE 893
            |.|:|.|.|||...::.::.:|.|.: .:|.||||:|.|.:.:|:||....|  .:.:.|.||..
 Frog   925 ITRVEQLSPFPFDLVEKEVQKYPNAE-LIWCQEEHKNQGYYDYVKPRIRTTIHRAKPVWYAGRDP 988

  Fly   894 APTPATGIGKVHKREVDEIVAAPFEL 919
            |..||||..|.|..|:...:...|.|
 Frog   989 AAAPATGNKKTHMTELRRFLDTAFNL 1014

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1544NP_651849.1 sucA 35..918 CDD:236499 330/933 (35%)
TPP_E1_OGDC_like 178..449 CDD:238974 104/278 (37%)
Transket_pyr 569..772 CDD:280874 102/218 (47%)
OxoGdeHyase_C 779..917 CDD:293475 52/143 (36%)
ogdhXP_012814170.1 sucA 49..1013 CDD:236499 330/933 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D134699at2759
OrthoFinder 1 1.000 - - FOG0000624
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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