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Protein Alignment mesh and susd2

DIOPT Version :9

Sequence 1:	NP_001163782.1	Gene:	mesh / 43688	FlyBaseID:	FBgn0051004	Length:	1454	Species:	Drosophila melanogaster
Sequence 2:	XP_021332092.1	Gene:	susd2 / 793335	ZFINID:	ZDB-GENE-080225-20	Length:	825	Species:	Danio rerio

Alignment Length:	826	Identity:	263/826 - (31%)
Similarity:	389/826 - (47%)	Gaps:	116/826 - (14%)

- Green bases have known domain annotations that are detailed below.

  Fly   442 LTFAPESGNMLGGQVVNITGPCFDPAIRVTCHFDTESVLGTYVDRNRV-ICVQPYLKAEGYIRFQ 505
            |...|.||::|||....|....|:|.|.:||.|.:|.:...|||.:.. .|:.|.|...|:|.|:
Zfish    58 LDIEPHSGSLLGGTDFKILNATFEPNITLTCRFSSEILTEGYVDESGAGHCISPLLYESGWIPFE 122

  Fly   506 ISVGTQRF----KWRGKYFVETPAA-------ATEKIFFTTDDVHKKNPAEIRITWNQYNLTSNA 559
            :|.....:    ||...:..:...|       ||:..::.|..|    ..::::||    ::|..
Zfish   123 VSTDGLNYDRSGKWLSVHHSKLGPAYKIILGNATQWQYYGTPGV----GGDLKMTW----ISSLI 179

  Fly   560 NA-NVMISLWGYRET------KIEPQLEYIDVIEASYSNSGSYVITPSNYINRNNINRDMQFGFL 617
            .| .|.:.||||.||      ..|.:.:|:..:.....|:|.:..||....|..::   ...|.:
Zfish   180 KAERVNVELWGYSETGEAYSSDWEAEWKYLYSVGRDVPNTGVFSFTPQIADNPFSL---WDLGSM 241

  Fly   618 QIN-LTQPDQYSGLAISPVLWSRPIPLAWYMAPQWERQHGKRWARALCDNWIRADRFLRNFAADL 681
            :|: .|:||   |......|||....:||::...: |:....||...|..|.:.::.:.:|..::
Zfish   242 RISPSTKPD---GARDVNALWSEEHAVAWHLEEAF-RKDSAGWALKKCLLWDKEEKSMPDFLTEI 302

  Fly   682 PLCPCTLDQAVLDKGRFRPDRECDKDSNPSCLRHRGAIHCV--VSGTPVAQGAEQQCCYDRYGFL 744
            ..|||||.||..|.|||..|..||.::...|:.|.||:|||  :.|:| ..||.||||||..|..
Zfish   303 TDCPCTLAQARADTGRFHTDYGCDIEAGSLCVYHPGAVHCVRAIQGSP-EYGAGQQCCYDSTGAQ 366

  Fly   745 MLTYDQMWGSRPRRVHNLGKMPWNEASKVPSLSMWFHDMRPFYSCCYWQEEQAVGCETYRFERRP 809
            :||.|.:.||.|.|.|:.|..|:.:..:||..|.|.:|:..||.||.|..    .|| |.|..||
Zfish   367 VLTRDSIGGSTPDRGHDWGDPPYKKPPRVPGFSHWKYDVISFYYCCLWSH----NCE-YYFTHRP 426

  Fly   810 SQDCVAYQAPGIAGVFGDPHFVTFDGTAYTFNGLGEFVLARSVDESNKFEVQGRFEQLPVNYYGE 874
            |.||..||.|..|.|.|||||:||||..:||||.||:.|..|  .:.:..||||.|.:.......
Zfish   427 SSDCRTYQPPRAAAVLGDPHFITFDGVTFTFNGKGEYTLVHS--PAFQLSVQGRTEPMRFENGSS 489

  Fly   875 VKATQLTAVAMRGNTTTTIEVRLRPLHARWRYRLDVLADGRRVYFDRESLKFQH-----FDGVTV 934
            ..||:|.:|||:...:..|||||..           .||..:|:.:::.|.|..     ..||.|
Zfish   490 ALATRLCSVAMKEKDSDIIEVRLAD-----------TADQLQVFMNQQELLFSEQKWIDLKGVFV 543

  Fly   935 YTPTYLLNQSQVVVQFDAGIGVEVVENEGYMTGRVFLPWKFINKTAGLFGNWSFNKLDDFMLPNG 999
            ::|    ..|.|.|.|.:|.|:||..:.|.||..|.||....|.|.||.|..:.|..||....:|
Zfish   544 FSP----KPSNVTVMFPSGAGLEVRTSAGVMTLSVLLPHDLQNHTFGLLGTMNDNPQDDLTSSDG 604

  Fly  1000 QVAQLN--LNDLRSIHTNFGIKWMLTDREVPGVGAALFKREFGRMSG--YYA---NATFQPNYVL 1057
            .:...|  ..|:.|    :...|.:|:.      .:||..:...:..  |||   :.:|.||:.:
Zfish   605 TIIPSNSSAQDIFS----YCAGWAITNE------TSLFTYDTNHLLNEYYYAPKHDPSFIPNFSM 659

  Fly  1058 --DPADFLPANRSYDLERAEELC-GECMQ-CQYDYAMTL------NRDLAHFTKNYYDTIVNMQA 1112
              ||.|.|       :|....|| |:... |:|| |:::      |..|..: :::.||...::.
Zfish   660 TEDPEDPL-------VEATLRLCSGDGADFCKYD-ALSMRSLKQGNATLRAY-RSHTDTQTALEP 715

  Fly  1113 ENAVRVVSCGVLQTPRFGRKLSFDFMPGAKVSFECNEGFILIGDQRRECLSNGLWNIPEYGYTEC 1177
                 |.|||.|..|..|:|....::.||.|||.||.|:.|.|.|.|.|.::|.|:..:   |.|
Zfish   716 -----VQSCGWLSPPNHGQKEGTLYLEGATVSFSCNRGYGLFGSQNRTCQADGTWSGQD---THC 772

  Fly  1178 LREVYYTRRVAFIAIGIIFLVICPLMLCIVCGVYRYRQKQ--LKED 1221
            :.|     ....|.:|.:..|:..:::.|...||..:||:  :|.|
Zfish   773 VAE-----NTLAIVLGSVGAVLALVVMVIAIIVYSKKQKKEAMKHD 813

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.