DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mesh and zgc:112964

DIOPT Version :10

Sequence 1:NP_001163782.1 Gene:mesh / 43688 FlyBaseID:FBgn0051004 Length:1454 Species:Drosophila melanogaster
Sequence 2:NP_001314798.1 Gene:zgc:112964 / 503764 ZFINID:ZDB-GENE-050306-47 Length:300 Species:Danio rerio


Alignment Length:276 Identity:70/276 - (25%)
Similarity:99/276 - (35%) Gaps:84/276 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   166 MYWYFDKDMYGGRGD--YQFDIHASMTQLHKNLNFQLPFYGFRFNYTRLSLNGYLEFSDPPEYLT 228
            |::.|..:    .||  |..|.:.:.|.:  ||.....|:|..:|....::||||.|..|....|
Zfish    31 MFYSFGSE----AGDTVYTADGNENSTVI--NLESPFVFFGRTYNNIYANINGYLTFKQPSSDYT 89

  Fly   229 YPLVFPIKD--------WPAKRDPSFMGIF----FSKCRVGRIYPSDIDQRTPGVYFRVERDLMG 281
            :. .|||..        | ...|.|...|.    :|...|......||:...|.:.|        
Zfish    90 FQ-YFPINGSEDIIAPLW-TNADVSGNDIIAYQQYSSGDVLTRTTQDINHYFPNLSF-------- 144

  Fly   282 RTDRFGVEVRERTMWDIRQGVVGADTFIPKHVVIATWKNVSFAGGIDNSLYTTNT---FQMVLAT 343
                       |..|                |::.||..|.:.       |.:|.   ||:||.:
Zfish   145 -----------RATW----------------VLVVTWDQVDYT-------YQSNAASLFQVVLVS 175

  Fly   344 DEVYTYIIFNYAVLNWLSHTEAGGDTTKGEGGVPAYVGFNAGNGTQAYEYNPYSQN-MVIRDLAN 407
            ....::|:.||            ||....:..|.|  ||:..|.| ||...|.|.| .:|.:|.|
Zfish   176 GSDVSFILMNY------------GDCALTQNMVQA--GFDTINST-AYYVIPGSNNGTLIPNLMN 225

  Fly   408 RGWANGFPGRHIFRVD 423
            ....| .|||.:|||:
Zfish   226 SSNVN-VPGRWVFRVN 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
meshNP_001163782.1 NIDO 259..419 CDD:214712 39/163 (24%)
TIG 446..511 CDD:460355
AMOP 660..803 CDD:461048
VWD 811..999 CDD:214566
CCP 1121..1171 CDD:214478
zgc:112964NP_001314798.1 NIDO 104..241 CDD:470642 48/196 (24%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.