| Sequence 1: | NP_001163782.1 | Gene: | mesh / 43688 | FlyBaseID: | FBgn0051004 | Length: | 1454 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_038939693.1 | Gene: | Sned1 / 316638 | RGDID: | 1566079 | Length: | 1504 | Species: | Rattus norvegicus |
| Alignment Length: | 592 | Identity: | 131/592 - (22%) |
|---|---|---|---|
| Similarity: | 209/592 - (35%) | Gaps: | 182/592 - (30%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 196 LNFQLPFYGFRFNYTRLSLNGYLEFSDPPEYLTYPLVFPI-KDWPAKRDPSFMGIFFSKCRVGRI 259
Fly 260 YPSDIDQRTPG-VYFRVERDLMGRTDRFGVEVRERTMWDIRQGVVGADTFIPKHVVIATWKNVSF 323
Fly 324 AGGIDNSLYTTNTFQMVLATDEVYTYIIFNYAVLNWL--SHTEAGGDTTKGEGGVPAYVGFNAGN 386
Fly 387 GTQAYEYNPYSQNMVIRDLANRGWAN-GFPGRHIFRVDE-QILIGSCNKDIDAALL--PLTFAPE 447
Fly 448 SGNMLGGQVVN--ITG------PCFDPAIRVTCHFDTESVLGTYVDRNRVICVQPYLKAEGYIRF 504
Fly 505 QISVGTQRFKWRGKYFVETPAAATEKIFFTTDDVHKKNPAEIRITWNQYNLTSNANANVMISLWG 569
Fly 570 YR----ETKI-----EPQL---EYIDVI-----------EASYSNSGSYVITPSNYINRNNINR- 610
Fly 611 ---DMQFGFLQINLTQPDQYSGLAISPVLWSRPIPLAWYMAPQWERQHGKRWARALCDNWIRADR 672
Fly 673 FLRN----FAADLPLC------------------PCTLDQAVLDKGRFRPDRECDKDSNPSCLRH 715
Fly 716 RGAIHCV 722 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| mesh | NP_001163782.1 | NIDO | 259..419 | CDD:214712 | 56/163 (34%) |
| AMOP | 660..805 | CDD:281737 | 15/85 (18%) | ||
| VWD | 811..999 | CDD:214566 | |||
| CCP | 1121..1171 | CDD:214478 | |||
| Sned1 | XP_038939693.1 | NIDO | 104..260 | CDD:214712 | 59/171 (35%) |
| EGF_CA | 272..308 | CDD:238011 | 7/43 (16%) | ||
| EGF_CA | 311..347 | CDD:238011 | 6/51 (12%) | ||
| EGF_CA | 387..423 | CDD:238011 | 4/35 (11%) | ||
| EGF_CA | 433..464 | CDD:238011 | 6/65 (9%) | ||
| EGF_CA | 545..577 | CDD:238011 | |||
| EGF_CA | 585..616 | CDD:238011 | |||
| EGF_CA | 621..655 | CDD:238011 | |||
| EGF_CA | <664..693 | CDD:238011 | |||
| CCP | 698..752 | CDD:153056 | |||
| EGF_CA | 754..789 | CDD:238011 | |||
| EGF_CA | 793..827 | CDD:238011 | |||
| EGF_CA | 931..966 | CDD:238011 | |||
| fn3 | 1009..1089 | CDD:394996 | |||
| fn3 | 1108..1189 | CDD:394996 | |||
| FN3 | 1205..1297 | CDD:238020 | |||
| EGF_CA | 1412..1443 | CDD:238011 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 1 | 1.000 | 69 | 1.000 | Domainoid score | I9412 |
| eggNOG | 1 | 0.900 | - | - | E1_KOG4291 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 3 | 2.810 | |||||