DRSC/TRiP Functional Genomics Resources

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Protein Alignment mesh and si:ch73-329n5.6

DIOPT Version :9

Sequence 1:NP_001163782.1 Gene:mesh / 43688 FlyBaseID:FBgn0051004 Length:1454 Species:Drosophila melanogaster
Sequence 2:XP_009305187.1 Gene:si:ch73-329n5.6 / 101883339 ZFINID:ZDB-GENE-131121-171 Length:452 Species:Danio rerio


Alignment Length:473 Identity:99/473 - (20%)
Similarity:133/473 - (28%) Gaps:197/473 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 ANENISTE-EFEDQIINAVPE-------------PVKVTKPKAQAEFV---------------EV 56
            |.|..:|. |...:|.|..|:             ||..|.|:...|..               |.
Zfish    50 ATETTTTNPETTTEITNTTPDTTTETTTVDTTTIPVTTTTPETTTETTTEETTTTTTPETTTEET 114

  Fly    57 PKATP----------APKKAEADNPKTKP-LALQKPTLIPVVHVSSRGTDDILTVAGLKPEKMFG 110
            ...||          .|:....:...|.| ...::.|..|........|.:..|:|         
Zfish   115 TTTTPETTTEETTTTTPETTTEETTTTTPETTTEETTTTPETTTEDTTTTESTTIA--------- 170

  Fly   111 ALIMPNDYLGELYDVDNSGYNWDPNNNVAPPTTY--STAAG--GYTITAARLAELRSNFMYWYFD 171
                             |...|     .||...|  .:|||  |||..                 
Zfish   171 -----------------STTAW-----TAPAIFYPFGSAAGDTGYTEV----------------- 196

  Fly   172 KDMYGGRGDYQFDIHASMTQLHKNLNFQLPFYGFRFNYTRLSL--NGYLEFSDP-PEYLTYPLVF 233
                 |...||:            :.|..||..|..||:.:.:  ||.|.|:.| ||  ..|:.|
Zfish   197 -----GYESYQY------------VTFSTPFTFFTRNYSSIYVNNNGLLTFNQPLPE--ANPVPF 242

  Fly   234 PIKD--------WPAKRDPSFMGIFFSKCRVGRIYPSDIDQRTPGV--YFRVERDLMGRTDRFGV 288
            |...        |....|..:...:|.:...|.:    :|:.|..:  ||         .||   
Zfish   243 PSNGNEDYIAALWTELDDMGYGNYWFHEYINGSV----LDRATKDINQYF---------PDR--- 291

  Fly   289 EVRERTMWDIRQGVVGADTFIPKHVVIATWKNVSFAGGIDNSLYTTN-------TFQMVLATDEV 346
                              .|....|.:.||..|     .....||.|       |||.||.:...
Zfish   292 ------------------GFAASWVFVVTWDYV-----FTTDFYTLNNHLGQAITFQAVLISGGG 333

  Fly   347 YTYIIFNYA-VLNWLSHTEAGGDTTKGEGGVPAYVGFNAGNGTQAYEY----NP-YSQNMVIRDL 405
            :::|:.||. ........|||.||.                |:..|..    || ||    |.:|
Zfish   334 FSFILLNYGDCAGTYFPVEAGYDTI----------------GSTDYHVILYGNPGYS----ISNL 378

  Fly   406 ANRGWANGFPGRHIFRVD 423
            .|....| .|||..|.|:
Zfish   379 KNTTNVN-LPGRWAFLVN 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
meshNP_001163782.1 NIDO 259..419 CDD:214712 40/174 (23%)
AMOP 660..805 CDD:281737
VWD 811..999 CDD:214566
CCP 1121..1171 CDD:214478
si:ch73-329n5.6XP_009305187.1 NIDO 255..394 CDD:295411 45/198 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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