DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mesh and LOC100485083

DIOPT Version :10

Sequence 1:NP_001163782.1 Gene:mesh / 43688 FlyBaseID:FBgn0051004 Length:1454 Species:Drosophila melanogaster
Sequence 2:XP_031761683.1 Gene:LOC100485083 / 100485083 XenbaseID:XB-GENE-29077611 Length:1015 Species:Xenopus tropicalis


Alignment Length:594 Identity:141/594 - (23%)
Similarity:216/594 - (36%) Gaps:150/594 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 EADNPKTKPLALQKPTLIPVVHVSSRGTDDILTVAGLKPEKMFGALIMPNDYLGELYDVDNSGYN 131
            |:..|:|             |...|..|.:..|.| .:||..|    ..:|...|:|        
 Frog   355 ESTTPET-------------VFTESGSTTETQTDA-TEPETTF----TESDTTTEMY-------- 393

  Fly   132 WDPNNNVAPPTTYS---------TAAGGYTITAARLAELRSNFMYWYFDKDMYGGRGDY---QFD 184
               ...:.|.|||:         ||......|..|....|:..:|      .||...|:   :.|
 Frog   394 ---TGTIIPETTYTPSYFTTYSQTAQSTIQQTTERQVIYRNALLY------PYGPGLDFVTIKSD 449

  Fly   185 IHAS-MTQLHKNLNFQLPFYGFRFNYTRLSLNGYLEFSDPPEYLTYPLVFPIKDWPAKRDPSFMG 248
            ..|| ..||..|::    .:|..|:...:..||.:.|:           .||..:.....|:...
 Frog   450 DGASEAIQLSMNIS----IFGKSFSSLYIDTNGLISFN-----------LPIYTYTPAHLPAIGN 499

  Fly   249 IFFSK--CRVGRIYPSDIDQRTPGVYFR--VERDLMGRTDRFGVEVRERTMWDIRQGVVGADTFI 309
            :|.:.  ..|..::.|||       |:|  .|..|:.:...           |||:.....: |.
 Frog   500 MFIAPFWADVYNVFQSDI-------YYRESTEASLLSQATS-----------DIRRYFHNMN-FS 545

  Fly   310 PKHVVIATWKNVSFAGGIDNSLYTTNTFQMVLATDEVYTYIIFNYAVLNWLSHTEAGGDTTKGEG 374
            .|.|.:.||..|.:.|   :|....||||.|:.||...||::|||..:.|.:.|.:||.:..|.|
 Frog   546 AKWVFVVTWHKVPYFG---SSSSKVNTFQAVITTDGNLTYVMFNYGDIEWTTGTASGGSSVSGLG 607

  Fly   375 GVPAYVGFNAGNGTQAYEYNPYSQNMVIRDLANRGWAN-GFPGRHIFRVDEQILIGSCNKDIDAA 438
            |:||..|.|:||.|..||. |.|.:..|.:||:.  :| ||.||..|:|::  ||..........
 Frog   608 GIPALAGINSGNFTGFYEI-PGSMSASIINLAST--SNVGFSGRWAFQVND--LIPDVLNGKTTL 667

  Fly   439 LLPLTF------------APESGNMLGGQVVNITGPCFDPAIRVTCHFDTESVLGTYVDRNRVIC 491
            |.|..:            ||.|.|:  ..|:.|.|..:.               ..||:.|    
 Frog   668 LYPYGYALDTVTEGLDDHAPYSVNL--STVIPIFGTNYS---------------SLYVNYN---- 711

  Fly   492 VQPYLKAEGYIRFQISVGTQ--------RFKWRGKYFVETPAAATEKIFF-TTDDVHKKNPAEIR 547
                    |.|.|...||.|        ...:...::....:.....||| .:.|....:.|...
 Frog   712 --------GLISFSAPVGPQTPQNLPLSNIAFLAPFWTHVSSYVGGYIFFRLSRDAELLSRATSD 768

  Fly   548 ITWNQYNLTSNANANVMISLWGYRETKIEPQLEYIDVIEASYSNSGSYVITPSNYINRNNINRDM 612
            |: :.:|:|..:...|::..|    ::.|.....::..:...|:.|:......||.:.|......
 Frog   769 IS-SYFNITYFSAQWVLVVTW----SRTENITNKVNTFQTILSSDGNVTYLLFNYADINWTTGTA 828

  Fly   613 QFGFLQINL 621
            ..|..||.|
 Frog   829 AGGASQIGL 837

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
meshNP_001163782.1 NIDO 259..419 CDD:214712 56/162 (35%)
TIG 446..511 CDD:460355 14/64 (22%)
AMOP 660..803 CDD:461048
VWD 811..999 CDD:214566
CCP 1121..1171 CDD:214478
LOC100485083XP_031761683.1 NIDO 218..352 CDD:470642
NIDO 504..653 CDD:214712 58/173 (34%)
NIDO 738..889 CDD:470642 20/105 (19%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.