DRSC/TRiP Functional Genomics Resources

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Protein Alignment mesh and si:ch211-39f2.3

DIOPT Version :9

Sequence 1:NP_001163782.1 Gene:mesh / 43688 FlyBaseID:FBgn0051004 Length:1454 Species:Drosophila melanogaster
Sequence 2:XP_009305155.1 Gene:si:ch211-39f2.3 / 100330672 ZFINID:ZDB-GENE-131126-52 Length:5336 Species:Danio rerio


Alignment Length:1315 Identity:259/1315 - (19%)
Similarity:405/1315 - (30%) Gaps:506/1315 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   177 GRGDYQFDIHASMTQLHKNLNFQLPFYGFR--FNYTRLSLNGYLEFSDPPEYLTYPLVFP----- 234
            |.||.:.|  .|...:...:.|..||..|.  :|...:|.||:|.| |.|.|..||..||     
Zfish  2054 GVGDIETD--RSDDGISSVIYFLRPFIFFEQTYNQVYISNNGFLTF-DWPWYSYYPYQFPGYRGQ 2115

  Fly   235 --IKDWPAKRDPSFMG-IFFSKCRVGRIYPS---DIDQRTPGVYFRVERDLMGRTDRFGVEVRER 293
              |....|..|..|.| |.:.:...|.:..:   ||:|..|                   ::|..
Zfish  2116 DIIAPLWADIDNRFTGDISYQQYTSGSVISNATQDINQYFP-------------------DLRFS 2161

  Fly   294 TMWDIRQGVVGADTFIPKHVVIATWKNVSFAGGIDNSLYTTNTFQMVLATDEVYTYIIFNYAVLN 358
            ..|                |.:.||..|.:   ..|| .|..:||:|..:|...::|:.||..:.
Zfish  2162 ATW----------------VFVVTWDRVPY---YPNS-RTETSFQVVFISDGHLSFILMNYGTVA 2206

  Fly   359 WLSH--TEAGGDTT---------------------KGEGGVPAYVGFNAGNGTQAYEYNPYSQNM 400
             .||  .:||.||:                     .....||....|.|.||.:..::|.::.  
Zfish  2207 -PSHRFVQAGYDTSNSRYYFSITSSLQSDITNLNHSSNVDVPGRWAFRADNGLRGCQFNGFAV-- 2268

  Fly   401 VIRDLANRGWANGFPGRHIFRVDEQILIGSC-------NKDIDAALLPLTFA------------- 445
               .|.:..|::                .:|       |..:..:|.|.:::             
Zfish  2269 ---QLGDSFWSD----------------ATCQQKCICTNSGLQCSLEPCSYSQACRAAVFQYSCQ 2314

  Fly   446 --PESGNMLGG---------QVVNITGPCFDPAIRVTCHFDTESVLGTYVDRNRVICVQPYLKAE 499
              |.....:.|         ||.:..|.|                  |||.........||.:.|
Zfish  2315 NIPRQTCTISGDPHYYTFDYQVFHFQGTC------------------TYVLSEACNNGLPYYRIE 2361

  Fly   500 GYIRFQISVGTQRFKWRGKYFVETPAAATEKIFFTTDDVHKKNPAEIRITWNQYNLTSNANANVM 564
            |           :.:.||                           ...::|              
Zfish  2362 G-----------KNEHRG---------------------------STHVSW-------------- 2374

  Fly   565 ISLWGYRETKIEPQLEYIDVIEASYSN------SGSYVITPSNYINRNNINRDMQFGF-LQIN-- 620
                    |::...|.|.:|||....:      :||:..||  :..||...:..|.|| |.|:  
Zfish  2375 --------TRMVRVLVYDEVIELVRDHNYEARINGSFAATP--FSLRNGSIQVYQSGFSLAISTD 2429

  Fly   621 ---LTQPDQYSGLAISPVLWSRPIPLAWYMAPQWERQHGKRWARALCDNW-IRADRFLRNFAADL 681
               |...|.||.::||       :|..:..|           ...||.|: :|:|...|:.:.::
Zfish  2430 FGLLVTYDAYSYVSIS-------VPYDYQNA-----------TCGLCGNYNLRSDDDFRSPSGEI 2476

  Fly   682 PLCPCTLDQAVLDKGRFRPDRECDKDSNPSC------------------LRHRGAIHCVVSGT-- 726
                  |...|    .|....:.|.|::|.|                  .|:....||.:.|.  
Zfish  2477 ------LSSDV----DFANSWKVDSDTDPECHNVRCTGLACAVCTTDERNRYSDTNHCGILGDVA 2531

  Fly   727 -PVA--------QGAEQQCCYD---RYGF---------LMLTYDQMWGSRPRRVHNLGKMPWNEA 770
             |.|        |...:.|.||   ..|:         :..|..|..|     || ||:  |.:.
Zfish  2532 GPFAACHSVLAPQTYIENCVYDLCLGQGYQPILCQALNVYATQCQQQG-----VH-LGQ--WRQQ 2588

  Fly   771 S----KVPSLSMWFHDMRPFYSCCYWQEEQAVGCETYRFERRPSQDCVAYQAPGIAGVFGDPHFV 831
            .    :.|..|.:              |.|..||...........:|   ..|.......||.::
Zfish  2589 GFCEIQCPEHSHF--------------EPQGTGCPATCSNPSAPMNC---PLPNQESCICDPGYI 2636

  Fly   832 --------------TFDGTAYTFNGLGEFVL-----ARSVDESNKFEVQGRFEQLPVNYYGEVKA 877
                          ||:|..||   .|:.|:     .|....|:...|..:::..|    |||..
Zfish  2637 LSAGVCVPQANCGCTFEGFYYT---EGQSVVLDGDCGRQCVCSSMSMVCHQYQCGP----GEVCE 2694

  Fly   878 TQLTAVAMR--GNTTTTIEVRLRPLHARWRYRLDVLADGRRVYFDRESLKFQHFDGVTV------ 934
            ........|  |..|.::| .|...|.                ||.:..::....|:|:      
Zfish  2695 VHNGVRGCRPIGYATCSVE-DLGSYHT----------------FDGQIFRYAGACGLTLARVMGP 2742

  Fly   935 -YTPTYLLNQSQV---------VVQFDAGIGVEV---------VENEGYMTG------------- 967
             ..|.::|...::         .::|:|| |::|         |:.:|.|.|             
Zfish  2743 SSLPHFVLTVEKIPRGLQDFARFLKFEAG-GIQVSIELGEGSNVKVDGQMVGLPVSVDSGQIRIY 2806

  Fly   968 -------------------------RVFLPWKFINKTAGLFGNWSFNKLDDFMLPNGQVAQLNLN 1007
                                     |:..|..:.....||.||.:.:..|:|..|:|.:    ||
Zfish  2807 HSSVRGFVLETNFGVTVRADWPHIVRITAPSTYNGTLGGLCGNLNGDIADEFYTPDGVL----LN 2867

  Fly  1008 DLRSIHTNFGIKW---MLT-------DREVPG--VGAALFKREFGRMS---GYYA--NATFQPNY 1055
            |.:.    |...|   .|:       |..|||  ...:.|.::.|.|:   |.:|  :.||.|..
Zfish  2868 DTQL----FAGSWRDGSLSAHCEEPFDSWVPGHFQSRSQFSQQCGIMALLDGPFAECSRTFNPQQ 2928

  Fly  1056 -VLDPADFLPANRSYDLERAEELCGECMQCQYDYAMTLNRDLAHFTKNYYDTIVNMQ---AENAV 1116
             :.|....|...:.......|.|.|..:.||.      ||......:|    :.|.:   .||:.
Zfish  2929 RIADCVQLLEQTQGAKEALCEALRGYTLLCQQ------NRIAVEDWRN----VTNCEPTCPENSH 2983

  Fly  1117 RVVSCGVLQTPRFGRKLSFDFMPG--AKVSFECNEGFILIGDQRRECLSNGLWNIPEYG------ 1173
            ..| ||. ..|.....|||.|...  .:...:||:|.:|.||   .|       :|..|      
Zfish  2984 YEV-CGT-SCPASCPSLSFPFQCSLQCQEGCQCNDGNVLNGD---HC-------VPPMGCGCHYS 3036

  Fly  1174 --YTECLREVYYTRRVAFIAI--GIIFLVICPLMLCI---VCGVYRYRQKQLKEDPQWQMPMLPR 1231
              |.:..:..::.....|..:  ||...|.|....|.   ||.|.         |.::.....|:
Zfish  3037 GKYYQAGQRFWHGEECQFSCVCDGITGNVQCTPSSCSEEEVCQVL---------DGEYGCHPRPQ 3092

  Fly  1232 SRASSARNLRTLNYD 1246
            :|.|::.:....::|
Zfish  3093 ARCSASGDPHYKSFD 3107

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
meshNP_001163782.1 NIDO 259..419 CDD:214712 35/185 (19%)
AMOP 660..805 CDD:281737 38/190 (20%)
VWD 811..999 CDD:214566 48/271 (18%)
CCP 1121..1171 CDD:214478 14/51 (27%)
si:ch211-39f2.3XP_009305155.1 NIDO 2120..2255 CDD:295411 35/174 (20%)
VWD 2308..2474 CDD:214566 47/263 (18%)
C8 2518..2591 CDD:214843 18/80 (23%)
TIL 2595..2648 CDD:280072 10/69 (14%)
VWC 2650..2703 CDD:302663 14/59 (24%)
VWD 2710..2864 CDD:278521 27/171 (16%)
C8 2904..2974 CDD:214843 17/79 (22%)
TIL 2978..3028 CDD:280072 17/61 (28%)
VWC 3033..3088 CDD:302663 11/63 (17%)
VWD 3095..3252 CDD:278521 2/13 (15%)
C8 3290..3361 CDD:285899
TIL 3365..3417 CDD:280072
VWC 3419..3472 CDD:302663
NIDO 3576..3711 CDD:214712
VWD 3774..3930 CDD:214566
C8 3977..4047 CDD:285899
TIL 4051..4104 CDD:280072
VWC 4106..4159 CDD:302663
VWD 4166..4320 CDD:278521
C8 4360..4430 CDD:214843
TIL 4434..4487 CDD:280072
VWC 4489..4544 CDD:302663
VWD 4551..4708 CDD:278521
C8 4746..4817 CDD:285899
TIL 4821..4873 CDD:280072
ZP 5024..5273 CDD:214579
Zona_pellucida 5153..5271 CDD:278526
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4291
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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