DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gycbeta100B and gucy2ca

DIOPT Version :9

Sequence 1:NP_524603.2 Gene:Gycbeta100B / 43682 FlyBaseID:FBgn0013973 Length:787 Species:Drosophila melanogaster
Sequence 2:XP_009297342.1 Gene:gucy2ca / 572052 ZFINID:ZDB-GENE-091118-67 Length:1025 Species:Danio rerio


Alignment Length:628 Identity:175/628 - (27%)
Similarity:261/628 - (41%) Gaps:171/628 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   183 RENQQLLEDAVATTTTGSATVVLAPSSDAERN-------NNHNGSNGS----------------- 223
            |:|:::..|....:...|:  ::.|..|.|||       .:..|.|.|                 
Zfish   404 RQNRRVRFDQKKWSHISSS--LITPLDDKERNYISLTIDEDKKGDNSSLIRKGRYDKKPVILKEL 466

  Fly   224 -NNNGMANNGNTVNVNNNNDGQQIASETDPSIALSTCPIAQ----DSFDCD--GDKEQKCLR-LL 280
             |.:|           |..|.|:|  |.:..:.:....:.:    ..|||.  |..| .|.| .|
Zfish   467 RNTDG-----------NFTDDQRI--ELNALLRIDYYNLTKFYGTVRFDCGVFGVFE-FCERGSL 517

  Fly   281 KNKSDDIERYDHVQFL------------------IREINVAAKSQVDAKKDEVPDDM-----EFL 322
            :...||...|....|:                  :...||....::.:....|.:.|     :|.
Zfish   518 RYVLDDKISYPDASFMDLEFRISVMYDIAKGMSYLHSSNVGVHGRLKSTNCVVDNRMVVKITDFG 582

  Fly   323 CEAPLISPATFCKVFPFHLMFDRQMKIVQAGKAVSRVIPRVAEE-----------NCSLIEVVEA 376
            |.. ::||.......|.|:   |...|.|.|...|..|  :::|           .||  ::.| 
Zfish   583 CNT-ILSPGKDLWTAPEHM---RVEGISQKGDVYSFAI--ISQEIILRKSPFHTSCCS--DMAE- 638

  Fly   377 IRPHLQLNFENILSHINTIYVLQTRQGAMSSRHEQRFLRLKGQMMYIPETDRILFQCYPSVMNLD 441
                             .:|::|..:|....|.:   |..:|    :.||:..||....|... :
Zfish   639 -----------------KLYLVQYPRGPNVFRPD---LSFEG----VGETEAELFVLIKSCWE-E 678

  Fly   442 DLTKK----------GLYISDVPLHDAARDLVLLSEKFEAEY--KLTKNLEMLTDKLQQTFRD-- 492
            |..|:          |...|:  ||:.|          .|.|  .|.:.|:|.:..|:....:  
Zfish   679 DPEKRPDFKRIEGALGKIFSN--LHNQA----------NASYMDNLIRRLQMYSRNLEHLVEERT 731

  Fly   493 --LESEKQKTDRLLYSVLPKSVANELRHQRPVPPKRYDSVTLMFSGIVGFGQYCAANTDPDGAMK 555
              .::|:.:.|:|.:.:||..|...|:....|.|:.||.||:.||.||||...|..:|    .|:
Zfish   732 ALYKAERDRADQLNFMLLPGPVVRSLKETGRVEPELYDEVTIYFSDIVGFTTICHHST----PME 792

  Fly   556 IVKMLNELYTVFDALTDSKRNLNVYKVETVGDKYMAVSGLPDHCED--HAKCMARVALDMMDMAK 618
            :|.|||::|..||::.|   :.:||||||:||.||..|||| .|..  ||..:..:|||:::.  
Zfish   793 VVDMLNDIYKNFDSILD---HHDVYKVETIGDAYMVASGLP-RCNGNRHAVDICLMALDILEF-- 851

  Fly   619 NVKMGS--------NPVQITIGIHSGEVVTGVIGNRVPRYCLFGNTVNLTSRTETTGVPGRINVS 675
               ||:        .|:.|.||||||....||:||::|||||||:|||..||.|:||:|.||:||
Zfish   852 ---MGTFQLRHLPGIPLWIRIGIHSGPCAAGVVGNKMPRYCLFGDTVNTASRMESTGLPLRIHVS 913

  Fly   676 EETYRLLCMAINQDDSFHLEYRGPVIMKGKPTPMDCWFLTRAT 718
            |.|.::|   ...|..|..|.||...:|||...|..| ||..|
Zfish   914 ESTIKIL---QRTDCEFECERRGETFLKGKGKEMTYW-LTGVT 952

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gycbeta100BNP_524603.2 HNOB 2..164 CDD:285002
HNOBA 326..516 CDD:285003 44/216 (20%)
CYCc 496..688 CDD:214485 87/201 (43%)
Guanylate_cyc 522..714 CDD:278633 90/201 (45%)
gucy2caXP_009297342.1 Periplasmic_Binding_Protein_Type_1 31..365 CDD:299141
PKc_like 428..698 CDD:304357 60/317 (19%)
Pkinase_Tyr 451..689 CDD:285015 52/285 (18%)
CYCc 736..929 CDD:214485 89/208 (43%)
Guanylate_cyc 763..950 CDD:278633 91/203 (45%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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