DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gycbeta100B and npr3

DIOPT Version :9

Sequence 1:NP_524603.2 Gene:Gycbeta100B / 43682 FlyBaseID:FBgn0013973 Length:787 Species:Drosophila melanogaster
Sequence 2:XP_005165413.1 Gene:npr3 / 569395 ZFINID:ZDB-GENE-060531-91 Length:503 Species:Danio rerio


Alignment Length:427 Identity:80/427 - (18%)
Similarity:132/427 - (30%) Gaps:177/427 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   274 QKCLRLLKNKSDDIERYDHVQFLIREINVAA-----KSQVDAKKDEVPD-DMEFLCEAPLISPAT 332
            :|.||       :.:.|..::|.:|..|.|.     .:.||.:|||.|| .:..:||....|...
Zfish    55 KKALR-------EADAYAGLRFNVRFENSACGMDALYALVDRQKDERPDLVLGPVCEYAASSVTR 112

  Fly   333 FCKVFPFHLMFDRQMKIVQAGKAVSRV---------IPRVAEENCSLIEVVEAIRPHL------- 381
            ....:        .:.::.||...:..         :.|:|.....:.|..:||..|.       
Zfish   113 VASHW--------NIPVISAGALATGFNSKTPEYSHLTRIAPTYLKMAETFQAIFGHFGWRTAYL 169

  Fly   382 -----------QLNFENILS-----HINTIYVLQTRQGAMSSRHEQRFLRLKGQMMYIPETDRIL 430
                       ....|.:.:     ||:|.:       |:.:.:|:|.           :.|.|:
Zfish   170 IYDDDKDERNCYFTMEGVFTVLSEYHISTDF-------AVLNSNEERV-----------DPDGII 216

  Fly   431 FQCYPSVMNLDDLTKKGLYISDVPLHDAARDLVLLS--EKFEAEYKLTKNLEMLT---------- 483
            ...|.|.:.:  :..|.         |..|||:|.:  .|..::..:..|:|:..          
Zfish   217 TSVYGSEVVI--MCSKA---------DIVRDLMLAAHRRKLTSDSHIFFNIELFNSSSYGDGSWR 270

  Fly   484 --DK-----------------LQQT---FRDLESEKQKTDR------------------------ 502
              ||                 |:.|   |.|...|.:|:.:                        
Zfish   271 RRDKYDDEARAAYSFLNTVTLLRSTKPEFEDFSIEMKKSLQQSNIPICEDCSAVNMFMEGFHDAL 335

  Fly   503 LLYSV---------LPKSVANELRHQRPVPPKRYDSVTLMFSGIVGFGQYCA-ANTDPDGAMKIV 557
            |||::         |.|....|:.|         ......|.||.  ||... ||.|.:|...:|
Zfish   336 LLYAIALREVKSKGLTKKNGLEITH---------SMWNRTFEGIA--GQVSLDANGDRNGDFSVV 389

  Fly   558 KMLNELYTVFDALTDSKRNLNVYKVETVGDKYMAVSG 594
            :|           ||.:..    |.|||.: |...:|
Zfish   390 RM-----------TDPESG----KHETVMN-YFGTNG 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gycbeta100BNP_524603.2 HNOB 2..164 CDD:285002
HNOBA 326..516 CDD:285003 42/288 (15%)
CYCc 496..688 CDD:214485 28/133 (21%)
Guanylate_cyc 522..714 CDD:278633 19/74 (26%)
npr3XP_005165413.1 Periplasmic_Binding_Protein_Type_1 29..416 CDD:299141 80/427 (19%)
ANF_receptor 46..389 CDD:279440 70/388 (18%)
TM_EphA1 436..468 CDD:214014
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2114
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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