DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gycbeta100B and npr1b

DIOPT Version :9

Sequence 1:NP_524603.2 Gene:Gycbeta100B / 43682 FlyBaseID:FBgn0013973 Length:787 Species:Drosophila melanogaster
Sequence 2:XP_009290669.2 Gene:npr1b / 555911 ZFINID:ZDB-GENE-100805-4 Length:1070 Species:Danio rerio


Alignment Length:241 Identity:105/241 - (43%)
Similarity:150/241 - (62%) Gaps:18/241 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   478 NLEMLTDKLQQTFRDLESEKQKTDRLLYSVLPKSVANELRHQRPVPPKRYDSVTLMFSGIVGFGQ 542
            |||.|.::..|.:.:   ||:|.:.|||.:||.|||.:|:....|..:.:||||:.||.||||..
Zfish   837 NLEELVEERTQAYLE---EKRKAEALLYQILPHSVAEQLKRGETVQAEAFDSVTIYFSDIVGFTS 898

  Fly   543 YCAANTDPDGAMKIVKMLNELYTVFDALTDSKRNLNVYKVETVGDKYMAVSGLP-DHCEDHAKCM 606
            ..|.:|    .:::|.:||:|||.|||:.|   |.:||||||:||.||.||||| .:.:.|.:.:
Zfish   899 LSAEST----PLQVVTLLNDLYTCFDAIID---NFDVYKVETIGDAYMVVSGLPVRNGKLHGREI 956

  Fly   607 ARVALDMMDMAKNVKMGSNP---VQITIGIHSGEVVTGVIGNRVPRYCLFGNTVNLTSRTETTGV 668
            ||::|.:::..|..|:...|   :::.||||||.|..||:|.::|||||||:|||.:||.|:.|.
Zfish   957 ARMSLALLEAVKTFKIRHRPDEQLKLRIGIHSGPVCAGVVGLKMPRYCLFGDTVNTSSRMESNGE 1021

  Fly   669 PGRINVSEETYRLLCMAINQDDSFHLEYRGPVIMKGKPTPMDCWFL 714
            |.:|:||..|..:|    .:.:.|.||.||.|.||||......|.|
Zfish  1022 PLKIHVSSATRAVL----QEFNCFQLELRGDVEMKGKGKMRTYWLL 1063

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gycbeta100BNP_524603.2 HNOB 2..164 CDD:285002
HNOBA 326..516 CDD:285003 16/37 (43%)
CYCc 496..688 CDD:214485 88/195 (45%)
Guanylate_cyc 522..714 CDD:278633 87/195 (45%)
npr1bXP_009290669.2 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2114
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.