DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gycbeta100B and acy-2

DIOPT Version :9

Sequence 1:NP_524603.2 Gene:Gycbeta100B / 43682 FlyBaseID:FBgn0013973 Length:787 Species:Drosophila melanogaster
Sequence 2:NP_504553.1 Gene:acy-2 / 191607 WormBaseID:WBGene00000069 Length:1080 Species:Caenorhabditis elegans


Alignment Length:658 Identity:139/658 - (21%)
Similarity:247/658 - (37%) Gaps:191/658 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   148 VKAVASKL---HGVEVEIDIVKRKGEPIDEAEKERAIARENQQLLEDAVATTTTGSATVVLAPSS 209
            :||..||:   .|.|.          |.....|::..|..:..|:.|.:|...|...|:   ||.
 Worm   517 MKAKVSKMVEFWGAET----------PFANFTKKKFSASHDPALITDEIARRPTYINTI---PSM 568

  Fly   210 DAERNNNHNGSNGSNNNGMANNGNTVNVNNNNDGQQIASETDPSIALSTCPIAQDSFDCDGDKEQ 274
            ....||..|.|                .||.|........|.|:......|.::.|..|      
 Worm   569 TLIENNLTNFS----------------FNNINSMFNCELPTIPASPKLLWPFSRKSITC------ 611

  Fly   275 KCLRLLKNKSDDIERYDHVQFLIREINVAAKSQVDAKKDEVPDDMEFLCEAPLISPATFCKVF-P 338
                   |.||.:.                              :.|:|.....:....|.:: |
 Worm   612 -------NLSDCVL------------------------------LTFVCIPSAFANLLLCSLYCP 639

  Fly   339 FHLMFDRQMKIVQ----AGKAVSRVIPRVAEENCSLIEVVE-------AIRPHLQLN-------- 384
            ..::  :|:.:.|    .|.|:..::.||......||.:|.       .|.||:.:.        
 Worm   640 SDVL--QQISLQQFFTIIGLAMLSLLGRVCSYAGPLITMVAFLLSSCIPIGPHIIIKKSKLEGVM 702

  Fly   385 -FENIL------SHINTIYVLQTRQGAMSSRHEQRFLRLK-GQMMYIPETDRILFQCYPSVMNLD 441
             |.:::      ||:.::::|               .||. ....::...|.::||.   :::|.
 Worm   703 AFNSLIFLPSCVSHLVSVFIL---------------YRLPYSHRCFLFFADFVIFQV---LLSLF 749

  Fly   442 DLTKKGLYISDVPLHDAARDLVLLSEKFEAEYKLTKNLEMLTD-----------KLQQTFRDLES 495
            ......:|:..:..|     |.::|........|...::.:|:           ..|...||:|:
 Worm   750 PAYGAEVYVGYMGYH-----LSVVSISLSLLVVLLFFIDWITNYERKRESACHVSFQNEERDVET 809

  Fly   496 EKQKTDRLLYSVLPKSVA----------NELRHQRPVPPKRYDSVTLMFSGIVGFGQYCAANTDP 550
            .:.....|:.::||.|||          |||.      .:::::|.:||:.|..|..:. :..|.
 Worm   810 MQDINKILIENILPSSVAAKFLSPDRAVNELY------ARQHENVCVMFASIPNFKDFW-SEWDT 867

  Fly   551 DGAMKIVKMLNELYTVFDALTDSKRNLNVYKVETVGDKYMAVSGLPDHCEDH------------- 602
            :..::.:::|||:...||.|....:..:|.|::|||..|||.:||.:...|:             
 Worm   868 NRKLECLRLLNEIVCEFDKLLSKPKFSSVEKIKTVGSTYMAAAGLNESEADYDDIYLEKQNSGKY 932

  Fly   603 -------------AKCMARVALDMMDMAKNVKMGS-NPVQITIGIHSGEVVTGVIGNRVPRYCLF 653
                         |..|...||.|..:...:...| ...::.||:..|.:|.||||.:.|:|.::
 Worm   933 NNNIRHGNMAFRNANLMIEFALAMSQILDALNRDSFQNFELRIGMSVGPLVAGVIGAQKPQYDIW 997

  Fly   654 GNTVNLTSRTETTGVPGRINVSEETYRLLCMAINQDDSFHLEYRGPVIMKGKPTPMDCWFL---T 715
            ||||||.||.:|.|.|.:|:.:.:..|:|     |...:.::.||.:.:||...||:.:.:   :
 Worm   998 GNTVNLASRMDTHGEPRKIHATTDMGRVL-----QTGGYRVQSRGKIRVKGVKEPMETFLIEVDS 1057

  Fly   716 RATSSILG 723
            :..||:.|
 Worm  1058 KRNSSVSG 1065

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gycbeta100BNP_524603.2 HNOB 2..164 CDD:285002 6/18 (33%)
HNOBA 326..516 CDD:285003 41/238 (17%)
CYCc 496..688 CDD:214485 62/228 (27%)
Guanylate_cyc 522..714 CDD:278633 60/218 (28%)
acy-2NP_504553.1 CYCc 253..463 CDD:214485
Guanylate_cyc 308..459 CDD:278633
CYCc 817..1034 CDD:214485 63/228 (28%)
Guanylate_cyc 840..1054 CDD:278633 61/225 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2114
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.