DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gycbeta100B and phlp-2

DIOPT Version :9

Sequence 1:NP_524603.2 Gene:Gycbeta100B / 43682 FlyBaseID:FBgn0013973 Length:787 Species:Drosophila melanogaster
Sequence 2:NP_001337270.1 Gene:phlp-2 / 185690 WormBaseID:WBGene00009647 Length:1126 Species:Caenorhabditis elegans


Alignment Length:916 Identity:169/916 - (18%)
Similarity:291/916 - (31%) Gaps:332/916 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 IKKKA----MVSMEGQFLVRQIYDDEITYNLIGAAVEILNIPADDILELFGKTFFEFCQDSGYDK 85
            |:||:    :.|.:||...| |..||.|                        |..:.||....|.
 Worm    20 IEKKSRFLRLYSSDGQRSTR-IECDEHT------------------------TCAQICQQFSCDV 59

  Fly    86 ILQVLG--------------ATPRDFLQNLDALHDHLGTLYPGMRAPSFRCTEKDGELLLHYYSE 136
            |...:|              |..:||.:.|....::|.|          ..|.|..|.:|. |::
 Worm    60 ITLQIGNYHFRQLKSDTSPLAILQDFCRILTMSDENLET----------ESTSKALEDILS-YTD 113

  Fly   137 RPGLEHI---VIGIVKAVASKLHGVEV-EIDIVKRKGEPIDEAEKERAIARENQQLLEDAVATTT 197
            .|...||   .:|..:..|.....::: ..::|.|||:.|...:..||:...:...|:       
 Worm   114 SPAFRHIFSFFLGRPRIRAKSTLNLDILSEEVVIRKGKLIHTWQNARAVFYNSNIRLQ------- 171

  Fly   198 TGSATVVLAPSSDAERNNNHNGSNGSNNNGMANNGNTVNVNNNNDGQQIASETD----------P 252
                          .:||        .:..:......|:|:.:..|:.:..:.|          |
 Worm   172 --------------TKNN--------QDEALQIRNMKVDVHESKRGRALRLKDDDVCYLIIFQRP 214

  Fly   253 SIA---LSTCPIAQDSFDCDGDKEQKCL---RLLKNKS--------------------------- 284
            :|.   |:.....:.|...|...||..|   ::|.|::                           
 Worm   215 NILEAWLTRAQQVEKSNHVDASDEQLTLIPEQILNNEARVQILNLRRNSLISRPPTEKSMAPLGY 279

  Fly   285 -DDIERYDHVQFL-------------------IREINVAAK--SQVDA----------------K 311
             ||:.|...:|.:                   :|::|:::.  |.|.:                :
 Worm   280 IDDLYRVHSLQVIDLSANQILSFPIQLTLLSHLRQLNLSSNYISSVPSECSNMRRLQYLNLSNNQ 344

  Fly   312 KDEVPDDMEFL--CEAPLISPATFCKVFP--FHLMFDRQMKIVQAGKAVSRVIPRVAEENCSLIE 372
            .|.:||.:..|  .::..||...|.::.|  |||..:...   .||..:.: |.||.|.....|:
 Worm   345 LDTLPDSISELQNLQSLDISFNQFSQIPPCLFHLTLEMWR---LAGNNIEK-IDRVGEMQIQKID 405

  Fly   373 V-VEAIRPHLQLNFENIL-------SHINTIYVLQTRQGAMSSRHEQRF----LRLKGQ------ 419
            : ...:....:|:.|||.       |.|:|:::...|  .:...|.:|.    |.|.|:      
 Worm   406 LRRNVLDTSFRLDIENITHLDLRDNSMISTVHLTNLR--FLKVIHCERLQLSSLHLSGESLTHVY 468

  Fly   420 ----------MMYIPETDRILFQCYPSVMNLDDLTKKGLYISDVP----LHDAARDLVLL----- 465
                      :|.:|:..:.|...:....||.|      :|||.|    |......||.|     
 Worm   469 ADHNLLDSLVVMPLPQNLQTLSLSFNHFRNLPD------WISDCPNLTFLRANNNSLVALPERIF 527

  Fly   466 -SEKFEAEYKLTKNLEMLTDKLQQT-FRDLESEKQKTDRL---LYSVLPK--------------- 510
             |:...:.:.....:|.:.|..::. ...|...|.|...|   .:|:||:               
 Worm   528 YSQSLRSIFAFINEIEHIPDFGEENCLETLILYKNKLSSLPKHFFSILPRLRQLNISSNFIELLP 592

  Fly   511 -------------SVANELRHQRPVP----PKRYDSVTLMFSGIVGFGQYCAANTDPDGAMKIVK 558
                         ..||....:..||    .|....:.|..:.:         |:..|.|:..::
 Worm   593 YFDGSSFCRLQILRCANNYLTENSVPVIVNMKHLKIIDLSHNRL---------NSFDDSALSSLE 648

  Fly   559 MLNELYTVFDALTDSKRNLNVYKVETVGDKYMAVSGLPDHCEDHAKCMARV-ALDMMDMAKNVKM 622
            :|.:|            ||:..::..:.|                 |:|.: .|.::....|..:
 Worm   649 LLEDL------------NLSSNRLTRLAD-----------------CLALLPCLQVLRAHSNQLV 684

  Fly   623 ------GSNPVQITIGIHSGEVVTGVIGNRVP---RY----CLFG--NTVNLTSRTETTGVPGRI 672
                  .||.:. ||.:.|..:..|.:..:.|   |:    |..|  :|.|.....:.......|
 Worm   685 HVPEFRASNQLH-TIDVSSNNISLGTLQFKAPPNLRHFDVTCNSGDFDTENFPENAKMHSKMNTI 748

  Fly   673 NVSEETYRLLCMAINQDDSFHLEYRGPVIMKGKPTPMDCWFLTRATSSILGGTSSTGGSGGGGNG 737
            |:||.:..|....|....|     ||   ||.|    .|....|..::.       |...||.|.
 Worm   749 NISEGSQNLFGFQIGVSGS-----RG---MKNK----QCIRQVRVENTF-------GFIDGGSNS 794

  Fly   738 SLDSPL 743
            .:.|.:
 Worm   795 YMSSSI 800

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gycbeta100BNP_524603.2 HNOB 2..164 CDD:285002 33/160 (21%)
HNOBA 326..516 CDD:285003 53/261 (20%)
CYCc 496..688 CDD:214485 42/242 (17%)
Guanylate_cyc 522..714 CDD:278633 41/211 (19%)
phlp-2NP_001337270.1 leucine-rich repeat 232..253 CDD:275380 6/20 (30%)
leucine-rich repeat 254..288 CDD:275380 3/33 (9%)
PLN00113 283..>718 CDD:331614 86/485 (18%)
leucine-rich repeat 289..311 CDD:275380 1/21 (5%)
leucine-rich repeat 312..334 CDD:275380 4/21 (19%)
leucine-rich repeat 335..357 CDD:275380 4/21 (19%)
leucine-rich repeat 358..379 CDD:275380 6/20 (30%)
leucine-rich repeat 380..440 CDD:275380 14/63 (22%)
leucine-rich repeat 441..485 CDD:275380 8/45 (18%)
leucine-rich repeat 486..508 CDD:275380 7/27 (26%)
leucine-rich repeat 509..534 CDD:275380 5/24 (21%)
leucine-rich repeat 554..577 CDD:275380 6/22 (27%)
leucine-rich repeat 578..602 CDD:275380 0/23 (0%)
leucine-rich repeat 603..625 CDD:275380 4/21 (19%)
leucine-rich repeat 626..649 CDD:275380 4/31 (13%)
leucine-rich repeat 650..672 CDD:275380 7/50 (14%)
leucine-rich repeat 673..694 CDD:275380 3/20 (15%)
PP2Cc 754..985 CDD:214625 15/66 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2114
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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