DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gycbeta100B and odr-1

DIOPT Version :9

Sequence 1:NP_524603.2 Gene:Gycbeta100B / 43682 FlyBaseID:FBgn0013973 Length:787 Species:Drosophila melanogaster
Sequence 2:NP_001362115.1 Gene:odr-1 / 181479 WormBaseID:WBGene00003848 Length:1047 Species:Caenorhabditis elegans


Alignment Length:546 Identity:144/546 - (26%)
Similarity:229/546 - (41%) Gaps:152/546 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   275 KCLRLLKNKSDDIERYDHVQ--FLIREINVAAK-----------SQVDAKKDEVPDDM------- 319
            |.|:.|...|  |..:.|:|  ..:.:||...|           .|:||:..:||:..       
 Worm   592 KGLQYLHKSS--IGYHGHLQASTCLIDINWVLKLTLYGVSNFMSDQLDAENIKVPEQAAHMITYP 654

  Fly   320 EFLC--------------EAPLI---SPA--TFCKVFPFHLMFDRQMKIVQAGKAVSRVIPRVAE 365
            :::|              :.|.:   ||.  .:|....|::|.:|:...        .:|..|..
 Worm   655 QYVCFPPEHIREYDDSGKQPPRVVRGSPKGDIYCVGMIFYMMVEREDPY--------HLIHSVER 711

  Fly   366 ENCSLIEVVEAIRPHLQLNFENILSHINTIYVLQTRQGAMSSRHEQRFLRL-KGQMMYIPETDRI 429
            .|.:||:.:        || ||.:..|...|           |.|...|.: |......|:....
 Worm   712 PNATLIKQI--------LN-ENHMPRITDDY-----------RQENMLLEMCKECWDRNPDKRPT 756

  Fly   430 LFQCYPSVMNLDDLTKKGLYISDVPLHDAARDLVLLSEKFEAEYKLTKNLEMLTDKLQQTF---- 490
            :.:...|:..:..|:|..|          ...::.:|||:             .|:|:|..    
 Worm   757 IKKLIESISTVYPLSKGNL----------VDQMIRMSEKY-------------ADELEQMVAIRT 798

  Fly   491 RDLESEKQKTDRLLYSVLPKSVANELRHQRPVPPKRYDSVTLMFSGIVGFGQYCAANTDPDGAMK 555
            .||...:.:|.|||..:||.|:|.:|::...:||:.|:|.|:||..|..|.. ....:.|:   :
 Worm   799 ADLADAQMQTMRLLNEMLPASIAKDLKNGLIMPPRSYESATVMFVQICDFNA-LMKRSSPE---Q 859

  Fly   556 IVKMLNELYTVFDALTDSKRNLNVYKVETVGDKYMAVSGLPDHCED-HAKCMARVALDMMDMA-- 617
            ::..||::|..||  |..||: :.|||||.|:.||..||:|...|. |...:|.::|::.:::  
 Worm   860 VIAFLNDIYDQFD--TVIKRH-DAYKVETTGETYMVASGVPHENEGRHIFEVAEISLEIREISYI 921

  Fly   618 ------KNVKMGSNPVQITIGIHSGEVVTGVIGNRVPRYCLFGNTVNLTSRTETTGVPGRINVSE 676
                  ||.|:     :|.||.|:|.:..||||.|.|||||||:|||..||.::...|.:|..||
 Worm   922 YVLQHDKNYKL-----RIRIGFHAGPIAAGVIGIRSPRYCLFGDTVNFASRMQSNCPPNQIQTSE 981

  Fly   677 ETYRLLCMAINQDDSFHLEY--RGPVIMKGKPTPMDCWFLTRATSSILGGTSSTGGSGGGGNGSL 739
            .|.|||.      ||...::  ||.|.:||| ..::|::|                     |..|
 Worm   982 ITARLLF------DSHEYKFVKRGIVHVKGK-GEVNCYWL---------------------NEHL 1018

  Fly   740 DSPLLQPATPTAGAATPIPVVAQRAA 765
            ......|..|    .||:|...:|.:
 Worm  1019 HEETEPPLPP----MTPVPNPLRRGS 1040

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gycbeta100BNP_524603.2 HNOB 2..164 CDD:285002
HNOBA 326..516 CDD:285003 43/199 (22%)
CYCc 496..688 CDD:214485 75/200 (38%)
Guanylate_cyc 522..714 CDD:278633 75/202 (37%)
odr-1NP_001362115.1 Periplasmic_Binding_Protein_type1 63..378 CDD:385651
PK_GC 495..768 CDD:270894 40/205 (20%)
CYCc 803..996 CDD:214485 77/210 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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