DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gycbeta100B and odr-1

DIOPT Version :10

Sequence 1:NP_524603.2 Gene:Gycbeta100B / 43682 FlyBaseID:FBgn0013973 Length:787 Species:Drosophila melanogaster
Sequence 2:NP_001362115.1 Gene:odr-1 / 181479 WormBaseID:WBGene00003848 Length:1047 Species:Caenorhabditis elegans


Alignment Length:546 Identity:144/546 - (26%)
Similarity:229/546 - (41%) Gaps:152/546 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   275 KCLRLLKNKSDDIERYDHVQ--FLIREINVAAK-----------SQVDAKKDEVPDDM------- 319
            |.|:.|...|  |..:.|:|  ..:.:||...|           .|:||:..:||:..       
 Worm   592 KGLQYLHKSS--IGYHGHLQASTCLIDINWVLKLTLYGVSNFMSDQLDAENIKVPEQAAHMITYP 654

  Fly   320 EFLC--------------EAPLI---SPA--TFCKVFPFHLMFDRQMKIVQAGKAVSRVIPRVAE 365
            :::|              :.|.:   ||.  .:|....|::|.:|:...        .:|..|..
 Worm   655 QYVCFPPEHIREYDDSGKQPPRVVRGSPKGDIYCVGMIFYMMVEREDPY--------HLIHSVER 711

  Fly   366 ENCSLIEVVEAIRPHLQLNFENILSHINTIYVLQTRQGAMSSRHEQRFLRL-KGQMMYIPETDRI 429
            .|.:||:.:        || ||.:..|...|           |.|...|.: |......|:....
 Worm   712 PNATLIKQI--------LN-ENHMPRITDDY-----------RQENMLLEMCKECWDRNPDKRPT 756

  Fly   430 LFQCYPSVMNLDDLTKKGLYISDVPLHDAARDLVLLSEKFEAEYKLTKNLEMLTDKLQQTF---- 490
            :.:...|:..:..|:|..|          ...::.:|||:             .|:|:|..    
 Worm   757 IKKLIESISTVYPLSKGNL----------VDQMIRMSEKY-------------ADELEQMVAIRT 798

  Fly   491 RDLESEKQKTDRLLYSVLPKSVANELRHQRPVPPKRYDSVTLMFSGIVGFGQYCAANTDPDGAMK 555
            .||...:.:|.|||..:||.|:|.:|::...:||:.|:|.|:||..|..|.. ....:.|:   :
 Worm   799 ADLADAQMQTMRLLNEMLPASIAKDLKNGLIMPPRSYESATVMFVQICDFNA-LMKRSSPE---Q 859

  Fly   556 IVKMLNELYTVFDALTDSKRNLNVYKVETVGDKYMAVSGLPDHCED-HAKCMARVALDMMDMA-- 617
            ::..||::|..||  |..||: :.|||||.|:.||..||:|...|. |...:|.::|::.:::  
 Worm   860 VIAFLNDIYDQFD--TVIKRH-DAYKVETTGETYMVASGVPHENEGRHIFEVAEISLEIREISYI 921

  Fly   618 ------KNVKMGSNPVQITIGIHSGEVVTGVIGNRVPRYCLFGNTVNLTSRTETTGVPGRINVSE 676
                  ||.|:     :|.||.|:|.:..||||.|.|||||||:|||..||.::...|.:|..||
 Worm   922 YVLQHDKNYKL-----RIRIGFHAGPIAAGVIGIRSPRYCLFGDTVNFASRMQSNCPPNQIQTSE 981

  Fly   677 ETYRLLCMAINQDDSFHLEY--RGPVIMKGKPTPMDCWFLTRATSSILGGTSSTGGSGGGGNGSL 739
            .|.|||.      ||...::  ||.|.:||| ..::|::|                     |..|
 Worm   982 ITARLLF------DSHEYKFVKRGIVHVKGK-GEVNCYWL---------------------NEHL 1018

  Fly   740 DSPLLQPATPTAGAATPIPVVAQRAA 765
            ......|..|    .||:|...:|.:
 Worm  1019 HEETEPPLPP----MTPVPNPLRRGS 1040

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gycbeta100BNP_524603.2 HNOB 2..164 CDD:462233
HNOBA 326..516 CDD:462234 43/199 (22%)
Guanylate_cyc 522..714 CDD:425528 75/202 (37%)
odr-1NP_001362115.1 Periplasmic_Binding_Protein_type1 63..378 CDD:471960
PK_GC 495..768 CDD:270894 40/205 (20%)
CYCc 803..996 CDD:214485 77/210 (37%)
Blue background indicates that the domain is not in the aligned region.

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