DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ktch and adgrl2a

DIOPT Version :10

Sequence 1:NP_651845.2 Gene:Ktch / 43681 FlyBaseID:FBgn0039821 Length:755 Species:Drosophila melanogaster
Sequence 2:XP_073772399.1 Gene:adgrl2a / 57987 ZFINID:ZDB-GENE-000607-49 Length:1500 Species:Danio rerio


Alignment Length:764 Identity:176/764 - (23%)
Similarity:279/764 - (36%) Gaps:204/764 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 RVGQKANLRDLC--LNERGIPIRRRCQIRNGNR------------VWQSLDHVTCRSAPELSSS- 143
            |..:...|||:.  ..:||:.:.|.|.  .|.|            .|..       ..|:||:. 
Zfish   479 RFCESVELRDILWPQTQRGMLVERPCP--KGTRGTASYLCVLSTGTWNP-------KGPDLSNCT 534

  Fly   144 ---INLLA--VKSPPDMISQLSNLLTQTQEKLAAADVFSISEIFDSLVK---------KPERNAA 194
               :|.:|  ::|..:..:..:.|...|:..:.|.|:.|...:.:.||.         :|....:
Zfish   535 SHWVNQVAQKIRSGENAANLANELAKHTKGAIFAGDISSTMRLMEQLVDILDAQLQELRPSEKDS 599

  Fly   195 VVGDLMKI------CQKVM-----STDN----ETLRVSADANAT------NALLSNFED----YL 234
            ......|:      |:..|     :.||    |.|:...|.|.|      ..||...|:    ..
Zfish   600 TGRSFNKLQKRERTCRAYMKAIVDTVDNLLRPEALKSWRDMNTTEQTHAATMLLDTLEEGAFVLA 664

  Fly   235 DEL-SPTILKLNTTIFANSTEFTFHPLFDMGVIVLKTSELRVFFVDPEVRNVSGIVNFSG-GNMS 297
            |.| .|.|:|:..:...            :.|.||.|......|..|:          || |.:|
Zfish   665 DNLMEPAIVKVPASNII------------LDVYVLSTDGQVQDFRFPQ----------SGRGGIS 707

  Fly   298 HFEMLHLSDNEEDIRAMKNLESAVFIPEKLWTQLKRKGASYLVFKVYTRDSLFVETE-------E 355
                :.||.|...:.:                   |.|.:.|||.:|.....|:.||       :
Zfish   708 ----IQLSSNTVKLNS-------------------RNGVAKLVFALYKNLGQFLSTENATMKLGQ 749

  Fly   356 EIKRR-----PTSNVISITIPGLNDTKLPGKLPFFLRNAKANETQFEGGCGYWNY-ETWLSDGIS 414
            |:..|     ..|:||:.:|...:......:...|.......:..:...|.:||| |..:....|
Zfish   750 EVNGRNLSVAVNSDVIAASINKESSRVFISEPVIFTLEHIDMQHYYNSNCSFWNYSERTMMGYWS 814

  Fly   415 TSGGGSLEAS-SHPVILCHADHLTQFTF------LLGVSKMQAGLDTNEDDHSLDVITNVGLTLS 472
            |.|...:.|: ||..  |...|||.|..      |||..|:|..|        |.||:.||:.:|
Zfish   815 TQGCKLIHANKSHTT--CSCSHLTNFAVLMAHRELLGADKVQELL--------LSVISRVGIVVS 869

  Fly   473 LLGLLMIFITAAVFKSFRTLASTKILLNLCAALGLQLLFFLILSQSHLLEQLEQSESE-RCTLVG 536
            |:.|.|...|...|:..::..:| |..|||..|.:..|.|||        .::.:|.: .|:::.
Zfish   870 LICLAMSIFTFCFFRGLQSDRNT-IHKNLCINLFIAELIFLI--------GIDMTEPKLACSIIA 925

  Fly   537 AVMQYLLLVVFSWMFIIGFLQYQRYVRVIGVNHPRH-YILMSAVAAWTLPLIPTLLVVFLEPGSY 600
            .::.|..|..|:||.:.|...|...|.|....:.|. |..|   |.:.||.:...:...::..||
Zfish   926 GILHYFFLASFAWMCLEGVQLYLMLVEVFESEYSRRKYFYM---AGYLLPAVVVGVSAAVDFRSY 987

  Fly   601 RPNNS---SMDYPILCYPSGYGLSLGVILPIGLITVANAI--LVGYISWSVYTALFKRDL----- 655
            ....:   .||...:         ...|.|:..|.:.|.|  |:.......::...|.|.     
Zfish   988 GTKKACWLRMDNHFI---------WSFIGPVTFIIMLNLIFLLITMYKMMKHSTSLKPDSSRLEH 1043

  Fly   656 --------IFKQ--LGLFVLLFFLLGITWIFGLCTYFDFGRIFAYLFCLTATLQGFVLFLYFIVF 710
                    ..|.  :|.|.|| .|||:||.|||....:...:.||||.:..|.||..:|.:..:.
Zfish  1044 INYEDNKPFIKSWVMGGFALL-CLLGLTWSFGLFFISESSVVLAYLFTIFNTFQGMFIFTFHCLL 1107

  Fly   711 NKENQRAWL-----GLCCNSSKKRNQQTIQMPTDSILQGLSHSSTNSTS 754
            .|:.:|.:.     ..||:          ::.|:|     |||||.:::
Zfish  1108 QKKVRREYSKCLRHTYCCS----------RITTES-----SHSSTKTST 1141

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KtchNP_651845.2 7tmB2_Adhesion 458..718 CDD:320168 73/281 (26%)
TM helix 1 460..485 CDD:320168 10/24 (42%)
TM helix 2 495..517 CDD:320168 10/21 (48%)
TM helix 3 533..559 CDD:320168 6/25 (24%)
TM helix 4 574..594 CDD:320168 4/19 (21%)
TM helix 5 617..646 CDD:320168 6/30 (20%)
TM helix 6 656..682 CDD:320168 13/27 (48%)
TM helix 7 686..711 CDD:320168 8/24 (33%)
adgrl2aXP_073772399.1 None

Return to query results.
Submit another query.