DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ktch and mthl6

DIOPT Version :10

Sequence 1:NP_651845.2 Gene:Ktch / 43681 FlyBaseID:FBgn0039821 Length:755 Species:Drosophila melanogaster
Sequence 2:NP_788473.1 Gene:mthl6 / 38839 FlyBaseID:FBgn0035789 Length:480 Species:Drosophila melanogaster


Alignment Length:277 Identity:59/277 - (21%)
Similarity:111/277 - (40%) Gaps:46/277 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   460 SLDVITNVGLTLSLLGLLMIFITAAVFKSFRTLASTKILLNLC--AALGLQLLFFLILSQSHLLE 522
            |:..:..|| |:|::|.:   :|.||:...:.|.:   ||..|  ..:..:.:.:||.:...|  
  Fly   201 SMPAVPQVG-TISMVGCI---LTIAVYLYIKKLRN---LLGKCFICYVFCKFVQYLIWAGGDL-- 256

  Fly   523 QLEQSESERCTLVGAVMQYLLLVVFSWMFIIGFLQYQRYVRVIGVNHPRHYILMSAVAAWTLPLI 587
               ...:..|:|.|....:..|....|:.::.. |..:.:|:|..:...::.|:..:..|..|.|
  Fly   257 ---NLWNNICSLAGYTNYFFALASHFWLSVMSH-QIWKNLRLINRDERSYHFLIYNIYGWGTPAI 317

  Fly   588 PTLLVVFLE---------------PGSYRPNNSSMDYPILCYPSGYGLSLGVILPIGLITVANAI 637
            .|.:...::               .|.||...::.|:..:.|..|..|.|.:...:..|...|.|
  Fly   318 MTAITYLVDWAWEDRPDKLNWIPGVGLYRCWINTYDWSAMIYLYGPMLILSLFNVVTFILTVNHI 382

  Fly   638 LVGYISWSVYTALFKRDLIFKQLGLFVLLFFLLGITWIFGLCTYF----DFGR------IFAYLF 692
            :....|....|...::.:......|::.|..::|:|.|..:.|||    .|.|      .|.:|.
  Fly   383 MKIKSSVKSSTQQQRKCIQNNDFLLYLRLSVMMGVTGISEVITYFVKRHKFWRQVLRVPNFFHLG 447

  Fly   693 CLTATLQGFVLFLYFIV 709
                  .|.|:|:.||:
  Fly   448 ------SGIVVFVLFIL 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KtchNP_651845.2 7tmB2_Adhesion 458..718 CDD:320168 59/277 (21%)
TM helix 1 460..485 CDD:320168 7/24 (29%)
TM helix 2 495..517 CDD:320168 5/23 (22%)
TM helix 3 533..559 CDD:320168 5/25 (20%)
TM helix 4 574..594 CDD:320168 5/19 (26%)
TM helix 5 617..646 CDD:320168 7/28 (25%)
TM helix 6 656..682 CDD:320168 6/25 (24%)
TM helix 7 686..711 CDD:320168 8/30 (27%)
mthl6NP_788473.1 Methuselah_N 25..195 CDD:429053
7tmB3_Methuselah-like 211..471 CDD:410632 55/266 (21%)
TM helix 2 234..256 CDD:410632 3/21 (14%)
TM helix 3 264..291 CDD:410632 5/27 (19%)
TM helix 4 304..324 CDD:410632 5/19 (26%)
TM helix 5 353..382 CDD:410632 7/28 (25%)
TM helix 6 400..427 CDD:410632 6/26 (23%)
TM helix 7 435..460 CDD:410632 8/30 (27%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.