DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ktch and Pdfr

DIOPT Version :10

Sequence 1:NP_651845.2 Gene:Ktch / 43681 FlyBaseID:FBgn0039821 Length:755 Species:Drosophila melanogaster
Sequence 2:NP_001245501.1 Gene:Pdfr / 31234 FlyBaseID:FBgn0260753 Length:738 Species:Drosophila melanogaster


Alignment Length:573 Identity:121/573 - (21%)
Similarity:197/573 - (34%) Gaps:200/573 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   292 SGGNMSHFEMLHL---SDNEEDIRAMKN-LESAVFIPEKLWTQLKRKGASYLVFKVYTRDSLFVE 352
            |||.:.|.:.||:   .|.:  :..:.| |:....|..:.:|:|.|:..|       :..|....
  Fly    50 SGGRVRHADSLHIYYAVDGK--MTLLSNILDCGGCISAQRFTRLLRQSGS-------SGPSPSAP 105

  Fly   353 T----EEEIKRRPTSNVISIT--IPGLND-----TKLPG-------------------------- 380
            |    |.:....|||:....|  :|.|:|     |:.||                          
  Fly   106 TAGTFESKSMLEPTSSHSLATGRVPLLHDFDASTTESPGTYVLDGVARVAQLALEPTVMDALPDS 170

  Fly   381 -----------KLPFFLRNAKANETQFEGGCG---------------YWNYETWLSDGISTSG-- 417
                       ..|:.|..|.|..|.|| .|.               .|.::|.|....:.:|  
  Fly   171 DTEQVLGNLNSSAPWNLTLASAAATNFE-NCSALFVNYTLPQTGLYCNWTWDTLLCWPPTPAGVL 234

  Fly   418 ------GG--SLEASSHPVILCHAD--------------------------HLTQFTFLLGVSKM 448
                  ||  .::.....:..|..|                          .:.:....:|....
  Fly   235 ARMNCPGGFHGVDTRKFAIRKCELDGRWGSRPNATEVNPPGWTDYGPCYKPEIIRLMQQMGSKDF 299

  Fly   449 QAGLDTNEDDHSLDVITNVGLTLSLLGLLMIFITAAVFKSFRTLAS--TKILLNLCAALGLQLLF 511
            .|.:|......:|::   |||.|||..|:   ::..:|.:||:|.:  |||..||..|:.||::.
  Fly   300 DAYIDIARRTRTLEI---VGLCLSLFALI---VSLLIFCTFRSLRNNRTKIHKNLFVAMVLQVII 358

  Fly   512 FLILSQSHLLEQLEQSESER---------------CTLVGAVMQYLLLVVFSWMFIIG-FLQYQR 560
            .|.|    .|:|..:...|.               |.....:::|....:|.||||.| :|....
  Fly   359 RLTL----YLDQFRRGNKEAATNTSLSVIENTPYLCEASYVLLEYARTAMFMWMFIEGLYLHNMV 419

  Fly   561 YVRVIGVNHPRHYILMSAVAAWTLPLIPTLL-----VVFLEPG------SYRPNNSSMDYPILCY 614
            .|.|...:.|..:.   :...|.:|::.|.:     |::::..      :|   |.:..|.||  
  Fly   420 TVAVFQGSFPLKFF---SRLGWCVPILMTTVWARCTVMYMDTSLGECLWNY---NLTPYYWIL-- 476

  Fly   615 PSGYGLSLGVILPIGLITVANAI--LVGYISWSVYTALFKRDLIFKQLGLFVLLFFLLGIT---- 673
               .|..|.||| :....:.|.|  ||..:..|..:.:   :...|.:...::|..|||||    
  Fly   477 ---EGPRLAVIL-LNFCFLVNIIRVLVMKLRQSQASDI---EQTRKAVRAAIVLLPLLGITNLLH 534

  Fly   674 -------------WIFGLCTYFDFGRIFAYLFCLTATLQGFVLFLYFIVFNKE 713
                         |.:|  |:|           || :.|||.:.|.:...|.|
  Fly   535 QLAPLKTATNFAVWSYG--THF-----------LT-SFQGFFIALIYCFLNGE 573

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KtchNP_651845.2 7tmB2_Adhesion 458..718 CDD:320168 75/304 (25%)
TM helix 1 460..485 CDD:320168 8/24 (33%)
TM helix 2 495..517 CDD:320168 10/21 (48%)
TM helix 3 533..559 CDD:320168 8/26 (31%)
TM helix 4 574..594 CDD:320168 4/24 (17%)
TM helix 5 617..646 CDD:320168 9/30 (30%)
TM helix 6 656..682 CDD:320168 10/42 (24%)
TM helix 7 686..711 CDD:320168 6/24 (25%)
PdfrNP_001245501.1 HRM 213..272 CDD:397086 8/58 (14%)
7tmB1_PDFR 306..584 CDD:320389 75/307 (24%)
TM helix 1 308..333 CDD:320389 9/30 (30%)
TM helix 2 342..364 CDD:320389 10/25 (40%)
TM helix 3 391..418 CDD:320389 8/26 (31%)
TM helix 4 430..450 CDD:320389 3/22 (14%)
TM helix 5 469..498 CDD:320389 10/34 (29%)
TM helix 6 512..539 CDD:320389 7/26 (27%)
TM helix 7 546..571 CDD:320389 10/38 (26%)

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