DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15556 and mth-2

DIOPT Version :9

Sequence 1:NP_001247379.1 Gene:CG15556 / 43681 FlyBaseID:FBgn0039821 Length:755 Species:Drosophila melanogaster
Sequence 2:NP_001364698.1 Gene:mth-2 / 173752 WormBaseID:WBGene00017947 Length:971 Species:Caenorhabditis elegans


Alignment Length:762 Identity:158/762 - (20%)
Similarity:268/762 - (35%) Gaps:265/762 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 PELSSSINLLA--VKSPPDM---ISQLSNLLTQT---QEKLAAADVFSISEIFDSLVKKPERNAA 194
            ||.:::..:||  :|:..|.   |:.:|.:|.:|   .|..|..:...::||...|:     |:|
 Worm   314 PEPTTTATVLAPTLKNLSDSGVGINNVSTVLNETLTYSEMGANLNATQVAEISTILI-----NSA 373

  Fly   195 VVGDLMKICQKVMSTDNETLRVSADANATNALLSNFEDYLDELSPTILKLNTTIFANSTEFTFHP 259
            .|..|                   .|..:.|:|.|.::.| .:||||:..:    .||.:...:.
 Worm   374 NVPGL-------------------TAENSMAILHNLDNML-YVSPTIMYQS----GNSAQGVLNS 414

  Fly   260 LFDMGVIVLKTSELRVFFVDPEVRNVS-------------GIVNFSGGNMSHFEMLHLSDNEEDI 311
            |   |.:|..|.:.|:.:::.:....|             |:::..    |.||:::.:|:    
 Worm   415 L---GTMVDNTVDQRIEYLNGQNLGFSSKRLDCSNLGADDGLLDLG----SKFELINSTDS---- 468

  Fly   312 RAMKNLESAVFIPEKLWTQLKRKGASYLVFKVYTRDSLFV--------------------ETEEE 356
               .....::.:|  |......:..|::.|.:|...||||                    ||...
 Worm   469 ---LGKWHSILVP--LSDLCSTQDLSHVFFTIYRDTSLFVGPQQYRTYTGTNKPISSGEAETYTP 528

  Fly   357 IKRRPTS-----------NVISITI---PGLNDTKLPGKLPFFLRNAKANETQFEGGCG------ 401
            ..|.|.|           |..|.|:   |....|.||   |..:.:|    |....|..      
 Worm   529 PPRVPRSAGFYEAEPYQMNATSQTVPLSPCARQTSLP---PTPVMSA----TVMNNGVAVSVSAT 586

  Fly   402 --------------------------YWNY--ETWLSD---GISTSGGGSLEASSHPVILCHADH 435
                                      :|:.  ..|..|   .|.:...|.|||        ...|
 Worm   587 SEATMALLRFNISTLMKPLHGNLKVTWWDIGRNAWAEDRQCEIVSESDGILEA--------RCTH 643

  Fly   436 LTQFTFLLGVSKMQAGL-DTNEDDHSLDVITNV--GLTLSLLGLLMIFITAAVFKSFRTLASTKI 497
            ||.|..:     :.|.| |.|..|::|..:..|  ||::..|..|..|..:|...|   ||::::
 Worm   644 LTDFAII-----VDAALNDPNVCDNALITLGYVVNGLSIVSLAFLTFFSISAYINS---LANSRL 700

  Fly   498 -------------LLNLCAALGLQL--LFFLILSQSHLLEQLEQSESERCTLVGAVMQYLLLV-V 546
                         .|.|.....|.|  :||.:.|.       :....:.||.:.|||..|||. :
 Worm   701 YSYVRGHNLARRDFLALIYHFDLLLFYVFFTVFSN-------QDVSGDMCTAMAAVMYALLLCSL 758

  Fly   547 FSWMF-----IIGFLQYQRYVRVIGVNHPRHYILMSAVAAWTLPLIPTLLVVFLEPGS------- 599
            |..:|     |:.||....| |::.:......:|:::||      :|.:|.:||...:       
 Worm   759 FLTIFQALRNILVFLPTPAY-RLLNICFGTVPVLITSVA------LPFILSIFLLVFTKFFDRQD 816

  Fly   600 ----YRPNNSSMDYPILCYPSGYGLSLGVILPIGLITVANAILVGYISWSVYTALFKRDLIFKQL 660
                .||     ||          :...:|:|:.::.::..:...::.:.|:..:.::   |.|.
 Worm   817 CFCWVRP-----DY----------IVAAIIIPVTVLLLSTVVCTSFMIYKVFCGMKRK---FSQG 863

  Fly   661 G------------LFVLLFFLLGITWIFGLCT-YFDFGRIFAYLFCLTATLQGFVLFLYFIVFNK 712
            |            ..|::...||:.||....| |..:...:.|.|.:....||.:|.|.|:.   
 Worm   864 GHHYDPNVITKIVSIVVMQISLGLPWILQFGTLYSPYTTFWHYTFTIVLGSQGTILLLIFLY--- 925

  Fly   713 ENQRAWLGLCCNSSKKRNQQTIQMPTDSIL----QGLSHSSTNSTSI 755
            :..|||                  ..||.|    |..|.:||..|.:
 Worm   926 KRYRAW------------------QADSTLKSRGQSYSKNSTKRTKL 954

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15556NP_001247379.1 7tm_4 481..703 CDD:304433 54/266 (20%)
mth-2NP_001364698.1 GPS 607..656 CDD:197639 13/61 (21%)
7tm_GPCRs 662..933 CDD:421689 68/326 (21%)
TM helix 1 664..690 CDD:410628 7/25 (28%)
TM helix 2 706..735 CDD:410628 6/28 (21%)
TM helix 4 779..803 CDD:410628 6/29 (21%)
TM helix 5 824..852 CDD:410628 4/37 (11%)
TM helix 6 868..897 CDD:410628 6/28 (21%)
TM helix 7 902..927 CDD:410628 7/27 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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