DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15556 and Adgre1

DIOPT Version :9

Sequence 1:NP_001247379.1 Gene:CG15556 / 43681 FlyBaseID:FBgn0039821 Length:755 Species:Drosophila melanogaster
Sequence 2:NP_001342651.1 Gene:Adgre1 / 13733 MGIID:106912 Length:931 Species:Mus musculus


Alignment Length:809 Identity:169/809 - (20%)
Similarity:303/809 - (37%) Gaps:152/809 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LVSGGTNPPLYALDQ--PNVARCLDYCHLKNLRFLLCVDADGQLSHNPYKDCNRGFCKAEDFELE 76
            |.|.|..|....||:  .:|..|.....|....| :|::..|..|.:    |..|| ....|::.
Mouse   204 LESSGGGPMFQGLDESCEDVDECSRNSTLCGPTF-ICINTLGSYSCS----CPAGF-SLPTFQIL 262

  Fly    77 YETDEGKEKRINRVEKTRVGQKANLRDLCLNERGIPIRRRCQIR------NGNRVWQSLDHVTCR 135
            ....:|....|:..:.|     ..|...|.|..|...   |...      ||...::.|: |||.
Mouse   263 GHPADGNCTDIDECDDT-----CPLNSSCTNTIGSYF---CTCHPGFASSNGQLNFKDLE-VTCE 318

  Fly   136 SAPE-----LSSSINLLAVKSPPDMISQLSNLLTQTQEKLAAADVFSISEIF----DSLVKKPER 191
            ...|     |...:|.:....|...|...........|.......|:...|.    :.|:.:.|:
Mouse   319 DIDECTQDPLQCGLNSVCTNVPGSYICGCLPDFQMDPEGSQGYGNFNCKRILFKCKEDLILQSEQ 383

  Fly   192 NAAVVGDLMKICQKVMSTDNETLRVSADANATNALLSNFEDYLDELSPT-----------ILKLN 245
                    ::.||.|...|..........|||..:|.|..:  ::.:|.           :|:..
Mouse   384 --------IQQCQAVQGRDLGYASFCTLVNATFTILDNTCE--NKSAPVSLQSAATSVSLVLEQA 438

  Fly   246 TTIFANSTEFTFHPLFDMGVIVLKTSELRVFFVDPEVRNVSGIVNFSGGNMSHFEMLHLSDNE-- 308
            ||.|..|.|.|    ..:|.|:|:|.|          ..:...:....||.|........|.|  
Mouse   439 TTWFELSKEET----STLGTILLETVE----------STMLAALLIPSGNASQMIQTEYLDIESK 489

  Fly   309 ---EDIRAMKNLESAV----------FIPEKLWTQLKRKGASYLVFKVYT------RDSLFVETE 354
               |:.:..:::..|.          .|.|.:.|     ||..:.|..:.      .:..|.:.:
Mouse   490 VINEECKENESINLAARGDKMNVGCFIIKESVST-----GAPGVAFVSFAHMESVLNERFFEDGQ 549

  Fly   355 EEIKRRPTSNVISITIPGLNDTKLPGKLPFFLRNAKANETQFEGGCGYWNYETWLSDGISTSGGG 419
            ...|.|..|.|:..|:.|.........:.:.|::.:..:......|..||  |.:.||..|..|.
Mouse   550 SFRKLRMNSRVVGGTVTGEKKEDFSKPIIYTLQHIQPKQKSERPICVSWN--TDVEDGRWTPSGC 612

  Fly   420 SLEASSHPVILCHADHLTQFTFLLGVSKMQAGLDTNEDDHSLDVITNVGLTLSLLGLLMIFITAA 484
            .:..:|....:|..:.:.....::...::..       :.||.:|::||..:||:.|.:...|..
Mouse   613 EIVEASETHTVCSCNRMANLAIIMASGELTM-------EFSLYIISHVGTVISLVCLALAIATFL 670

  Fly   485 VFKSFRTLASTKILLNLCAALGLQLLFFLILSQSHLLEQLEQSESE-RCTLVGAVMQYLLLVVFS 548
            :.::.:. .:|.:.|:||..|.|..:.|        |..::::::: .|.::...:.||.|..|.
Mouse   671 LCRAVQN-HNTYMHLHLCVCLFLAKILF--------LTGIDKTDNQTACAIIAGFLHYLFLACFF 726

  Fly   549 WMFIIGFLQY--QRYVRVIGVNHPRHYILMSAVA-AWTLPLIPTLLVVFLEPGSYRPNNSSMDYP 610
            ||.:...:.:  .|.::|:.....|:..::...| .:.||::..::...::|..|..:|.     
Mouse   727 WMLVEAVMLFLMVRNLKVVNYFSSRNIKMLHLCAFGYGLPVLVVIISASVQPRGYGMHNR----- 786

  Fly   611 ILCY---PSGYGLS-LGVILPIGLITVANAILVGYISW-------SVYTALFK----RDLIFKQL 660
              |:   .:|:..| ||   |:.:|...|::|:.:..|       ||.:.:.|    |.|.||. 
Mouse   787 --CWLNTETGFIWSFLG---PVCMIITINSVLLAWTLWVLRQKLCSVSSEVSKLKDTRLLTFKA- 845

  Fly   661 GLFVLLFFLLGITWIFGLCTYFDFGRIFAYLFCLTATLQGFVLFLYFIVFNKENQRAWLGLCCNS 725
               :...|:||.:|:.|:........|.||||.:..:|||..:||...:.|::.:        :.
Mouse   846 ---IAQIFILGCSWVLGIFQIGPLASIMAYLFTIINSLQGAFIFLIHCLLNRQVR--------DE 899

  Fly   726 SKKRNQQTIQMPTDSILQGLSHSSTNSTS 754
            .||...:...:.:.|...|:..||..|||
Mouse   900 YKKLLTRKTDLSSHSQTSGILLSSMPSTS 928

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15556NP_001247379.1 7tm_4 481..703 CDD:304433 55/240 (23%)
Adgre1NP_001342651.1 EGF_CA 33..63 CDD:238011
EGF_CA 81..115 CDD:214542
EGF_CA 133..172 CDD:214542
EGF_CA 173..>203 CDD:214542
EGF_CA 222..258 CDD:238011 10/41 (24%)
EGF_CA 272..>301 CDD:214542 7/36 (19%)
EGF_CA 319..352 CDD:214542 5/32 (16%)
Cell attachment site. /evidence=ECO:0000255 506..508 0/1 (0%)
GPS 591..640 CDD:197639 10/50 (20%)
7tmB2_EMR 644..906 CDD:320555 68/292 (23%)
TM helix 1 646..671 CDD:320555 9/24 (38%)
TM helix 2 680..702 CDD:320555 8/29 (28%)
TM helix 3 711..738 CDD:320555 6/26 (23%)
TM helix 4 755..775 CDD:320555 3/19 (16%)
TM helix 5 792..815 CDD:320555 8/25 (32%)
TM helix 6 839..864 CDD:320555 9/28 (32%)
TM helix 7 868..893 CDD:320555 10/24 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4193
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.