DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15556 and adgre14

DIOPT Version :9

Sequence 1:NP_001247379.1 Gene:CG15556 / 43681 FlyBaseID:FBgn0039821 Length:755 Species:Drosophila melanogaster
Sequence 2:XP_021330419.1 Gene:adgre14 / 108182849 ZFINID:ZDB-GENE-131120-49 Length:505 Species:Danio rerio


Alignment Length:574 Identity:138/574 - (24%)
Similarity:218/574 - (37%) Gaps:129/574 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   217 SADANAT------NALLSNFEDYLDELSPTILKLNTTIFANSTEFTFHPLFDMGVIVLKTSELRV 275
            |:.||..      |.:|.|.|    ||..|::|...|  :.:..||           |...|.||
Zfish    13 SSSANPNELTSYGNRVLINNE----ELMSTLVKQTDT--SANVSFT-----------LADVEGRV 60

  Fly   276 FFVDPEV----------RNVS------GIVNFSGGNMSHFEMLHLSDNEEDIRAMKNLESAVFIP 324
            |.|.|.|          ||.|      ||.|.:.|..| ..::.|..|     .|:||..|.|  
Zfish    61 FMVGPHVTLDEIPRLHTRNCSIDIDLIGIANNNNGTRS-AAVIFLGYN-----TMENLLKADF-- 117

  Fly   325 EKLWTQLKRKGASYLVFKVYTRDSLFVETEEEIKRRPTSNVISITIPGLNDTKLPGKLPFFLRNA 389
                                     |..|.:.:... .|:|||:|:|...:|.|...:.|..|:.
Zfish   118 -------------------------FNATNDTVNTM-MSSVISVTLPKTTNTALSKPVNFTFRHI 156

  Fly   390 KANETQFEGGCGYWNYETWLSDGISTSGGGSLEASSHPVILCHADHLTQFTFLLGVSKMQAGLDT 454
            :..:......|.|||...|:.||.|...      ::....:|...||:.|..:     ||.....
Zfish   157 REFDPSGSFSCVYWNISKWIVDGCSVLN------TNRSFTVCSCVHLSTFALI-----MQTRSHP 210

  Fly   455 NEDDHSLDVITNVGLTLSLLGLLMIFITAAVFKSFRTLASTKI----LLNLCAALGLQLLFFLIL 515
            .|.|..|:|:..|.:.:.||     |.:.|:....|...|..:    .:|:|.:|.|..|.|| |
Zfish   211 PESDSLLNVLNVVCVIVGLL-----FFSLALLTFTRCQWSPGVNNVARINICISLLLAHLLFL-L 269

  Fly   516 SQSHLLEQLEQSESERCTLVGAVMQYLLLVVFSWMFIIGFLQYQRYVRVIGVNHPRHYIL---MS 577
            :|..|  .|.:.:...|.|:..::.:|.|..|.||||...|.:.....:..::.....:|   :.
Zfish   270 TQQFL--SLIRRQKVLCMLISGLLHFLFLSGFVWMFIEAVLLFICVKNLSQISSQMKNVLRNKLL 332

  Fly   578 AVAAWTLPLIPTLLVVFLEPGSYRPNNSSMDYPILCYPSGY-GLSLGVILPIGLITVANAILVGY 641
            .|..:.:.|:...:...:.|..|....        |:...: |.....:.|:.:|...|.||...
Zfish   333 CVIGYAVALVVVSISAAVVPNGYGSEK--------CWIQMHKGFIWSFLGPVTIIIALNVILFIS 389

  Fly   642 ISWSVYTALFK-----------RDLIFKQLGLFVLLFFLLGITWIFGLCTYFDFGRIFAYLFCLT 695
            |.:|:.:|..|           :.::||.|..||    :||.:||.|..|  :..::...||.:.
Zfish   390 IGFSLKSAFKKLNADVSQLNQTKIVMFKTLAQFV----VLGCSWILGFFT--NSSKVLEILFLIL 448

  Fly   696 ATLQGFVLFLYFIVFNK----ENQRAWLGLCCNSSKKRNQQTIQMPTDSILQGL 745
            .:.||..:||.:.|.||    |.::.:..|......|....:.:...||.:.||
Zfish   449 NSQQGTFIFLIYCVLNKGIRQEYRKLFTSLYSGLKPKNFNWSSENTEDSTIHGL 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15556NP_001247379.1 7tm_4 481..703 CDD:304433 55/240 (23%)
adgre14XP_021330419.1 GPS 167..205 CDD:197639 12/48 (25%)
7tm_GPCRs 214..476 CDD:333717 68/283 (24%)
TM helix 1 217..241 CDD:320095 7/28 (25%)
TM helix 2 250..271 CDD:320095 8/21 (38%)
TM helix 3 285..307 CDD:320095 8/21 (38%)
TM helix 4 331..347 CDD:320095 2/15 (13%)
TM helix 5 365..388 CDD:320095 6/22 (27%)
TM helix 6 412..435 CDD:320095 10/26 (38%)
TM helix 7 439..464 CDD:320095 7/24 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4193
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.