DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15556 and LOC103909395

DIOPT Version :9

Sequence 1:NP_001247379.1 Gene:CG15556 / 43681 FlyBaseID:FBgn0039821 Length:755 Species:Drosophila melanogaster
Sequence 2:XP_021333738.1 Gene:LOC103909395 / 103909395 -ID:- Length:497 Species:Danio rerio


Alignment Length:561 Identity:136/561 - (24%)
Similarity:230/561 - (40%) Gaps:101/561 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   204 QKVMSTD--------NETLRVSADANATNALLSNFEDYLDELSPTILKLNTTIFANSTEFTFHPL 260
            |||  ||        :|.:.||:.:::::|..:....|..::..:..||.:|: ...|:.:.:..
Zfish     3 QKV--TDILTVAFNASEKISVSSSSSSSSASPAQLASYGTKVLKSSEKLISTL-VKPTDTSANVS 64

  Fly   261 FDMGVIVLKTSELRVFFVDPEVRNVSGIVNFSGGNMS-HFEMLHLSDNEEDIRAMKNLESAVFIP 324
            |.:..:     |.:||.|.|:| .:..|......|.| :.:::.::.|..|..|     :..|: 
Zfish    65 FTLAAV-----EGKVFMVGPQV-TLDKIPQLYTTNSSINIDLIGIAKNNNDRSA-----AVAFM- 117

  Fly   325 EKLWTQLKRKGASYLVFKVYTRDSLFVETEEEIKRRPTSNVISITIPGLNDTKLPGKLPFFLRNA 389
                        ||...:...:...|..|.:.||.. .|.|||.|:|..::|.|...:.|..|:.
Zfish   118 ------------SYTTMENLLKADFFNTTNDTIKTM-MSTVISATLPKTSNTALTKAVNFTFRHI 169

  Fly   390 KANETQFEGGCGYWNYETWLSDGISTSGGGSLEASSHPVILCHADHLTQFTFLLGVSKMQAGLDT 454
            :..|......|.|||...|:.||.|.....    |||.|  |...||:.|..:         :.|
Zfish   170 REFEPSGSLSCVYWNISEWIVDGCSVLNSN----SSHTV--CSCVHLSTFALI---------MQT 219

  Fly   455 NEDDHSLDVITNVGLTLSLLGLLMIFITAAVFKSFRTL-----ASTKILLNLCAALGLQLLFFLI 514
            :......|::..:.|...::||  :|.:.|:. ||...     .:....:|:|.:| |.....|:
Zfish   220 SSSPPPSDLLDLLNLVCVIVGL--VFFSLALL-SFALCQWSPGVNNVARINICISL-LSAHLLLL 280

  Fly   515 LSQSHLLEQLEQSESERCTLVGAVMQYLLLVVFSWMFIIGFLQYQRYVRVIGVNHPRHYILMS-- 577
            |:|..|  .|.:.:...|.::..::.:|.|..|.||||...|.:.....:..::..:..:|.|  
Zfish   281 LTQQFL--SLIRPQQVLCVVIAGLLHFLFLSAFVWMFIEAVLLFICVKNLSEISSRQREVLSSGF 343

  Fly   578 -AVAAWTLPLIPTLLVVFLEPGSYRPNNSSMDYPILC---YPSGYGLS-LGVILPIGLITVANAI 637
             .|..:.:.|:...:.:.|.|..|....        |   |..|:..| ||   |:.:|...|.|
Zfish   344 LCVIGYLVALVVVCVSIGLVPEGYGSEQ--------CWIKYDKGFIWSFLG---PVCVILALNLI 397

  Fly   638 LVGYISWSVYTALFK-----------RDLIFKQLGLFVLLFFLLGITWIFGLCTYFDFGRIFAYL 691
            |...|...:.:||.|           :.::||.||.||    :||..||.|..|  :...:...|
Zfish   398 LFIRIVIILKSALTKLNAEVSQTKQTKVMVFKTLGQFV----VLGCPWILGFFT--NGNEMLEIL 456

  Fly   692 FCLTATLQGFVLFLYFIVFNKE-NQRAW--LGLCCNSSKKR 729
            |.:..:.||..:||.:.|.|.| .|:.|  ....|:..|:|
Zfish   457 FLILNSQQGTFIFLIYCVLNNEIRQQYWKCFTFLCSGRKQR 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15556NP_001247379.1 7tm_4 481..703 CDD:304433 59/244 (24%)
LOC103909395XP_021333738.1 GPS 176..222 CDD:197639 17/60 (28%)
7tm_GPCRs 229..488 CDD:333717 70/281 (25%)
TM helix 1 229..253 CDD:320095 7/26 (27%)
TM helix 2 262..283 CDD:320095 6/21 (29%)
TM helix 3 297..319 CDD:320095 7/21 (33%)
TM helix 4 343..359 CDD:320095 2/15 (13%)
TM helix 5 377..400 CDD:320095 9/25 (36%)
TM helix 6 424..449 CDD:320095 12/30 (40%)
TM helix 7 451..476 CDD:320095 7/24 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.