DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15556 and adgrf3a

DIOPT Version :9

Sequence 1:NP_001247379.1 Gene:CG15556 / 43681 FlyBaseID:FBgn0039821 Length:755 Species:Drosophila melanogaster
Sequence 2:XP_021322955.1 Gene:adgrf3a / 101886922 ZFINID:ZDB-GENE-131121-607 Length:949 Species:Danio rerio


Alignment Length:859 Identity:181/859 - (21%)
Similarity:298/859 - (34%) Gaps:260/859 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 GTNPPLYAL--------DQPNVARCLDYCHLKNLRFLLCVDADGQLSHNPYK-DCNRGFCKAEDF 73
            ||...:||:        :|.:||...:...|.|.:|.:|.    .||...:| .||.. ..:|::
Zfish   220 GTFKCVYAIYGISHTASEQLDVALLPNIQALSNPQFPICT----SLSSTSFKVYCNIS-ADSENY 279

  Fly    74 ELEYETD-----------------------EGKEKR------INRVEKTRVGQKANLR------- 102
            .:.:...                       :.||..      ||...|..:.:..|::       
Zfish   280 TVTWNHSTSSTTVDTAGNRISYIAYVTILCDSKETLNVACTFINTRSKNNLNRTQNVQIPIIYAY 344

  Fly   103 -DLCLNERGIPI-------------------RRRCQIRNGNRVWQSLDHVTCRSA---------P 138
             .:|..|.|.||                   .|:|   ||.| | |.:..||.:|         .
Zfish   345 STVCDPEGGWPIAKSGYTATMPCDNSGVGWRTRKC---NGTR-W-STEISTCVNANLFDIKTDVQ 404

  Fly   139 ELSSSINLLAVKSPPDMISQLSNLLTQTQEKLAAADVFSISEIFDSLVKKPERNAAVVGDLMKIC 203
            ||:..|..  :|...|.:.|..|..|..:       .|:...|        |.:..:.|.:..:.
Zfish   405 ELNKGIGF--IKDNADQLFQRINDSTTLR-------TFTFPNI--------ETSVNIFGVMNDVS 452

  Fly   204 QKVMSTDNETLRVSADANATNALLSNFEDYLDELSPTILKLNTTIFANSTEFTFHPLFDMGVIVL 268
            .:..:..|:|:.....::|:|.|    .|.....:|.    |.:||. |.|:            |
Zfish   453 TRQQNQWNDTVMSKLVSSASNLL----NDPSGWQNPE----NKSIFI-SVEY------------L 496

  Fly   269 KTSELRVFFVDPEVRNVSGIVNFSGGNMSHFEMLHLSDNEEDIRAMKNLESAVFIPEKLWTQLKR 333
            ||.|        .:.|.|.:::         ...::|.|.:  .|:.|..|...|.:.....::.
Zfish   497 KTIE--------RMMNNSNLIS---------NTPYISSNAQ--MALCNHTSPADICKTFNASVRN 542

  Fly   334 KGASYLVF----------KVYTRDSLFVETEEEIKRRPTSNVISITIPGLNDTKLPGKLPFFLRN 388
            ...|.:||          |....||             .:.::|:|....|:|.....|.|  .:
Zfish   543 SDNSVVVFGFRNLYQILPKAEGNDS-------------NTTILSVTPVNANNTNRSITLEF--DS 592

  Fly   389 AKANETQFEGGCGYW--NYETWLSDGISTSGGGSLEASSHPVILCHADHLTQFTFLLGVSKMQAG 451
            ||.........|.||  |...|.|||...:|      ..:|. ||..||.:.||.|:  ||....
Zfish   593 AKQRLPNHMIYCVYWDENLNEWSSDGCRWAG------VDNPT-LCICDHNSAFTILM--SKNAET 648

  Fly   452 LDTNEDDHSLDVITNVGLTLSLLGLL-----MIFITAAVFKS----FRTLASTKILLNLCAALGL 507
            |.      .:|.:|..||.:|:|.||     .:.:..||.||    ||.:|    |.|:...|.|
Zfish   649 LP------YMDELTYAGLGISILSLLACLIIKVLVWDAVVKSPISNFRHVA----LFNISLCLLL 703

  Fly   508 QLLFFLILSQSHLLEQLEQSESERCTLVGAVMQYLLLVVFSWMFIIGFLQYQRYVRVIGVNHPRH 572
            ....||..|:.      |......|:::..:..:..|.||.||..:.|:...:.:.|......:.
Zfish   704 AHCMFLTTSKP------ESIPPNWCSILTLIKHFFFLAVFFWMLCLSFVLLHQMIYVFDRLRKKV 762

  Fly   573 YILMSAVAAWTLPLIPTLLVVFLE-----PGSYRPNNSSMDYPILCYPSGYGLSLG----VILPI 628
            ::.:|....:..|:| .:.|.::.     .|.|...::       |:.:..|...|    .|:||
Zfish   763 FLGLSITVGYACPII-AVAVTYISFNNGAEGEYYSKST-------CWLTYKGTLKGSIFAFIIPI 819

  Fly   629 GLITVANAILVGYISWSVYT-------ALFKRDLIFKQLGLFVLLFFLLGITWIFGL------CT 680
            |.|...|...:..:...:.|       |..::|:....:...|.|..:||::|:.|.      .|
Zfish   820 GAIVFVNLFTLAVVIMKIATPSISEAKARDEKDVAKSMIKTIVFLSPVLGLSWVLGFFVLGLDLT 884

  Fly   681 YFDFGRIFAYLFCLTATLQGFVLFLYFIVFNKENQRAWLGLCCNSSKKRNQQTIQMPTDSILQGL 745
            ...:..:..|.|.:..:|||    |:.::.|          |....|.|         |::|:..
Zfish   885 VKPWAALVNYSFTIFNSLQG----LFILLTN----------CVGEKKVR---------DALLKRF 926

  Fly   746 S-----HSSTNSTS 754
            .     ||.|.|:|
Zfish   927 KIKQSVHSKTESSS 940

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15556NP_001247379.1 7tm_4 481..703 CDD:304433 53/247 (21%)
adgrf3aXP_021322955.1 GPS 604..641 CDD:307782 16/43 (37%)
7tm_GPCRs 649..926 CDD:333717 69/323 (21%)
TM helix 1 652..676 CDD:320095 8/23 (35%)
TM helix 2 691..712 CDD:320095 7/24 (29%)
TM helix 3 723..745 CDD:320095 5/21 (24%)
TM helix 4 766..782 CDD:320095 3/16 (19%)
TM helix 5 805..831 CDD:320095 8/25 (32%)
TM helix 6 855..881 CDD:320095 6/25 (24%)
TM helix 7 890..915 CDD:320095 8/38 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4193
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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