DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15556 and dnai2

DIOPT Version :9

Sequence 1:NP_001247379.1 Gene:CG15556 / 43681 FlyBaseID:FBgn0039821 Length:755 Species:Drosophila melanogaster
Sequence 2:XP_031750209.1 Gene:dnai2 / 100495747 XenbaseID:XB-GENE-854694 Length:593 Species:Xenopus tropicalis


Alignment Length:489 Identity:98/489 - (20%)
Similarity:156/489 - (31%) Gaps:171/489 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 QLSHNPYKDCNRGFCKAEDFELE----YETDEGKEKRIN------------RVEK-----TRVGQ 97
            |.||    :.:......|.:|:|    ...:.|..|.||            :|||     ..:.|
 Frog    58 QCSH----EMSEHEVNTERYEMEARGINHVEGGWPKDINPQEMEQTIRFRKKVEKDDHYIATISQ 118

  Fly    98 KANLRDLCLNERGIPIRRRCQIRNGNRVWQSLDHVTCRSAPEL-----SSSINLLAVKSPPDMIS 157
            ..::.:.|:.:           .|...:::.....|    .||     :.|.|.:.|...|:.|.
 Frog   119 LGSVMEHCIKQ-----------NNAINIYEEYFEDT----EELEGMDETPSANTVNVFRDPNEIK 168

  Fly   158 QLSNLLT---QTQEKLAAA-----------DVFSISEIFD-SLVKKPERNAAVVGDLMKICQKVM 207
            :.:..|:   ....|||.|           |:...|.|:| .:..|||.....|..|  :|.:..
 Frog   169 RTATHLSWHPDGSRKLAVAYSCLDFQRAPKDMSYESYIWDIEIPNKPELTLKPVSPL--VCLEYN 231

  Fly   208 STDNETLRVSADANATNALLSNFEDYLDEL---SPTILKLNTTIFANSTEFTFHPLFDMGVIVLK 269
            ..|:..| |....|...|       |.|..   :|    :.:|:..:|..   .|::.  ||.|:
 Frog   232 PKDSHVL-VGGCYNGQIA-------YWDTRKGGNP----MESTVIEHSHR---DPVYK--VIWLQ 279

  Fly   270 TSELRVFFVDPEVRNVSGIVNFSG---GNMSHFEMLHLSDNEE----DIRAMKNLESAV------ 321
            :.              :|...||.   |.:..:::..||:..|    ||...:||::|:      
 Frog   280 SK--------------TGTECFSASTDGQILWWDIRKLSEPTEKLILDISKKENLDNALGAVSLE 330

  Fly   322 ---FIPEKLWTQLKRKGASYLVFKVYTRDSLFVETEEEIKRRPTSNVISITIPGLNDTKLPGKL- 382
               .:|.|              |.|.|...:.|....:.|..|..  |..|..|.:     |.: 
 Frog   331 FEPTLPTK--------------FMVGTEQGMIVSCNRKAKTPPEK--IVCTYGGHH-----GPIY 374

  Fly   383 -----PFFLRNAKANETQFEGGCGYWNYETWLSDGISTSGGGSLEASSHPVILCHADHLTQ---- 438
                 ||:.:|...        .|.|....|..|         ...||......|..:||.    
 Frog   375 SIQRNPFYPKNFLT--------VGDWTARIWSED---------CRESSIMWTKYHMSYLTDACWS 422

  Fly   439 ----FTFLLGVSKMQAGLDT-----NEDDHSLDV 463
                ..||  .:||...||.     .:::.||.|
 Frog   423 PTRPTVFL--TTKMDGTLDVWDYMYKQNNPSLSV 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15556NP_001247379.1 7tm_4 481..703 CDD:304433
dnai2XP_031750209.1 WD40 repeat 105..141 CDD:293791 6/46 (13%)
WD40 <172..495 CDD:225201 74/356 (21%)
WD40 repeat 172..221 CDD:293791 12/48 (25%)
WD40 repeat 226..265 CDD:293791 10/50 (20%)
WD40 repeat 273..314 CDD:293791 10/56 (18%)
WD40 repeat 326..367 CDD:293791 10/56 (18%)
WD40 repeat 373..409 CDD:293791 9/52 (17%)
WD40 repeat 416..441 CDD:293791 8/26 (31%)
tolA_full <509..>593 CDD:274303
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4193
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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