DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15556 and adgre5

DIOPT Version :9

Sequence 1:NP_001247379.1 Gene:CG15556 / 43681 FlyBaseID:FBgn0039821 Length:755 Species:Drosophila melanogaster
Sequence 2:XP_031754104.1 Gene:adgre5 / 100490425 XenbaseID:XB-GENE-952950 Length:727 Species:Xenopus tropicalis


Alignment Length:796 Identity:165/796 - (20%)
Similarity:281/796 - (35%) Gaps:194/796 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 GGTNPPLYALDQPNVARC--LDYCHLKNLRFLLCVDADGQLSHNP--YK-DCNRGFCKAE---DF 73
            |.|| .....|.....:|  :|.|.:...:   | .|:.:..:.|  |: .|..|:.:.:   :|
 Frog    57 GNTN-KFTPTDNKEQNKCEDIDECDINTHK---C-GANAKCKNTPGSYQCQCESGYRRKDNTTEF 116

  Fly    74 ELEYETDEGKEKR----INRVEKTRVGQKANLRDLCLNERGIPIRRRCQ------IRNGNRVWQS 128
            ..|:...:.||:.    ||  |...:......:.:|.|:.|. .:..||      ::|.....|.
 Frog   117 TDEFTPTDNKEQNKCDDIN--ECKELTNPCGPKSVCNNKPGF-FKCSCQDGYTDLLQNDTAHTQC 178

  Fly   129 L-------DHVTCRSAPELSSSINLLAVKSPPDMISQLSNLLTQTQEKLAAADVFSISEIFDSL- 185
            :       |..:|.|......:::        |.||.|:.|..|    |.......|.::.|.| 
 Frog   179 VVCKEGDGDKKSCDSNDSFQCALD--------DFISSLTPLCAQ----LVNDHSKKIQQLLDQLN 231

  Fly   186 --VKKPERNAAVVGDLMKICQKVMSTDNETLRVSADANATNALLSNFEDYLDELSPTILKLNTTI 248
              ..:..|.:  :.:.:|...||:.        .|:..|.|....|.|             |.|:
 Frog   232 GIFSRMSRQS--LEERLKSTGKVLK--------QAERLARNLSRLNHE-------------NITL 273

  Fly   249 FANSTEFTFHPLFDMG-----VIVLKTSELRVFFVDPEVRNVSGIVNFSGGNMSHFEMLHLSDNE 308
            .:|:.:.....  ..|     :|.:|:...|: .|||.........:|.......:..|......
 Frog   274 TSNNRQIELRT--QKGSRRSRMISVKSKRSRL-EVDPNTAAADSTDDFPLVGFLEYNSLAPLLEG 335

  Fly   309 EDIRAMKNLESAVFIPEKLWTQLKRKGASYLVFKVYTRDSLFVETEEEIKRRPTSNVISITIPGL 373
            ..|....|....:.|...:.|.|.|:..|.|              .:.|:.|.....|:.||   
 Frog   336 APIVGGSNSSPVILISPVISTFLSREDTSSL--------------NQSIRFRLEHTAINSTI--- 383

  Fly   374 NDTKLPGKLPFFLRNAKANETQFEGGCGYWNYE--TWLSDGISTSGGGSLEASSHPVILCHADHL 436
                            ..|.|.    |.:|:.:  .|     ||:|..:|| ||.....|...|:
 Frog   384 ----------------DPNRTT----CAFWSQDDTAW-----STAGCITLE-SSEQETNCSCVHM 422

  Fly   437 TQFTFLLGVSKMQAGLDTNEDDHSLDVITNVGLTLSLLGLLMIFITAAVFKSFRTLASTKILLNL 501
            |.|..|:.|:.::..:.:    ..|.:||.:||::|::.|.:..||....:|.|...:| |..:|
 Frog   423 TSFAILMAVNNVEEIVKS----WPLTLITLIGLSVSIICLSLCIITFIFCRSLRGTRNT-IHTHL 482

  Fly   502 CAALGLQLLFFLILSQSHLLEQLEQSESERCTLVGAVMQYLLLVVFSWMFIIGFLQYQRYVRVIG 566
            |.:|.|....||:...:|       :....|::|..::....|..|.||.:.|...|...|:|..
 Frog   483 CLSLFLGHCTFLLGINAH-------NNPVACSVVAGLLHTFYLASFCWMSLEGVELYLMLVQVFN 540

  Fly   567 VNHPRHYILMSAVAAWTLPLIPTLLVVFLEPGSYRPNNSSMDYPILCYPSGYGLSLGVIL----- 626
            .:..:.|:|:....      :|..:|..         ::|:      ||:|||..|...|     
 Frog   541 THLKKRYLLLIGYG------VPLAIVAI---------SASV------YPAGYGTQLHCWLSLERS 584

  Fly   627 -------PIGLITVANAILVGYISWSVYTALFKRDLIFKQLGLF----------VLLFFLLGITW 674
                   |:.:|.:.|:   |....:|:....|...|..::..:          |....:||..|
 Frog   585 FIWSFMGPVCVILLVNS---GIFVLTVWKLAEKMSQINPEMEKYRRIRSLTVTAVAQLSILGCCW 646

  Fly   675 IFGLCTYFDFGRIFAYLFCLTATLQGFVLFLYFIVFNKE---NQRAWLGLCCNSSKKRNQQTIQM 736
            :||...:......|||.|.:..||||..:|:...:.:|:   :...||.....         .:.
 Frog   647 VFGFLQFSSSSLFFAYAFSILNTLQGLQIFILHCLMSKKVRADYSRWLSAIAR---------CKA 702

  Fly   737 PTDSILQGLSHSSTNS 752
            ||.|.....|.|.|.:
 Frog   703 PTYSEFTSTSQSQTQT 718

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15556NP_001247379.1 7tm_4 481..703 CDD:304433 56/243 (23%)
adgre5XP_031754104.1 EGF_CA 21..>53 CDD:311536
EGF_CA 75..115 CDD:311536 8/43 (19%)
EGF_CA 133..167 CDD:214542 8/36 (22%)
GAIN <241..356 CDD:406802 23/140 (16%)
GPS 387..431 CDD:197639 16/53 (30%)
7tmB2_CD97 440..699 CDD:320554 67/294 (23%)
TM helix 1 443..467 CDD:320554 9/23 (39%)
TM helix 2 476..497 CDD:320554 8/21 (38%)
TM helix 3 507..529 CDD:320554 5/21 (24%)
TM helix 4 547..563 CDD:320554 4/30 (13%)
TM helix 5 582..605 CDD:320554 4/25 (16%)
TM helix 6 632..654 CDD:320554 6/21 (29%)
TM helix 7 658..683 CDD:320554 9/24 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 93 1.000 Inparanoid score I4935
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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