DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15556 and celsr3

DIOPT Version :9

Sequence 1:NP_001247379.1 Gene:CG15556 / 43681 FlyBaseID:FBgn0039821 Length:755 Species:Drosophila melanogaster
Sequence 2:XP_031757039.1 Gene:celsr3 / 100489102 XenbaseID:XB-GENE-852799 Length:3718 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15556NP_001247379.1 7tm_4 481..703 CDD:304433
celsr3XP_031757039.1 Cadherin_repeat 669..768 CDD:206637
Cadherin_repeat 776..876 CDD:206637
Cadherin_repeat 885..982 CDD:206637
Cadherin_repeat 990..1087 CDD:206637
Cadherin_repeat 1095..1189 CDD:206637
Cadherin_repeat 1197..1292 CDD:206637
Cadherin_repeat 1300..1398 CDD:206637
Cadherin_repeat 1406..1500 CDD:206637
Cadherin_repeat 1520..1601 CDD:206637
EGF_CA 1767..1802 CDD:238011
EGF_CA 1812..1844 CDD:238011
LamG 1847..2030 CDD:238058
EGF_CA 2056..2087 CDD:238011
Laminin_G_2 2123..2252 CDD:396680
EGF_CA 2277..2309 CDD:238011
EGF_CA 2309..2347 CDD:238011
EGF_Lam 2404..2449 CDD:214543
HormR 2453..2519 CDD:214468
GAIN 2536..2777 CDD:406802
GPS 2805..2854 CDD:413374
7tmB2_CELSR3 2865..3118 CDD:320659
TM helix 1 2868..2892 CDD:320659
TM helix 2 2901..2922 CDD:320659
TM helix 3 2932..2954 CDD:320659
TM helix 4 2973..2989 CDD:320659
TM helix 5 3008..3031 CDD:320659
TM helix 6 3054..3076 CDD:320659
TM helix 7 3080..3105 CDD:320659
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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