DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha3T and PAF2

DIOPT Version :10

Sequence 1:NP_651843.1 Gene:Prosalpha3T / 43679 FlyBaseID:FBgn0261395 Length:251 Species:Drosophila melanogaster
Sequence 2:NP_175158.1 Gene:PAF2 / 841128 AraportID:AT1G47250 Length:277 Species:Arabidopsis thaliana


Alignment Length:237 Identity:81/237 - (34%)
Similarity:124/237 - (52%) Gaps:10/237 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 FDSRTTIFSPEGRLYQVEYAMEAASQSGTCVGLLAKNGVLLATERSVDKLM-DTSIPVPRISWLN 68
            :|:..|.:||.|||:||||||||..|....:||.:::.|:||   .|:|.. :.|....:|..::
plant     6 YDTDVTTWSPTGRLFQVEYAMEAVKQGSAAIGLRSRSHVVLA---CVNKAQSELSSHQRKIFKVD 67

  Fly    69 ENIACCATGNTADGNVLVNQLRMIAQQYQFNFGEMIPCEQLVTNLCDIKQAYTQYGGKRPFGVSF 133
            ::|.....|.||||.||...:|..:..:.|.:...:|..:||.:|.|..|..||...|||:||..
plant    68 DHIGVAIAGLTADGRVLSRYMRSESINHSFTYESPLPVGRLVVHLADKAQVCTQRSWKRPYGVGL 132

  Fly   134 LYMGWDCRFGFQLYQSDPSGNYSGWKATCIGRKSGAAMEMLQKELFSKGYVSPSVEEAKDVAIKV 198
            |..|.| ..|..||.:.|||||..::|..||.:|.||...|:::.  :.:...|.|:....||..
plant   133 LVGGLD-ESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERKF--ESFQESSKEDLIKDAIMA 194

  Fly   199 MGMTLGRDSLTPEKLEIAFVQRYGNTTVFHILEKNEIHRLIE 240
            :..||..::|   |..:..|...|....||.|::..|.::|:
plant   195 IRETLQGETL---KSSLCTVSVLGVDEPFHFLDQESIQKVID 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha3TNP_651843.1 Ntn_hydrolase 3..218 CDD:469781 74/213 (35%)
PAF2NP_175158.1 proteasome_alpha_type_1 6..215 CDD:239718 75/217 (35%)

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